RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 FLYWCH2Q96CP2 140 aaKnown RBP17.51■□□□□ 0.39
TRIM54-202ENST00000380075 HINT2Q9BX68 163 aa17.51■□□□□ 0.39
TRIM54-202ENST00000380075 ZNRD1Q9P1U0 126 aa17.51■□□□□ 0.39
TRIM54-202ENST00000380075 PTPN13Q12923 2485 aa17.51■□□□□ 0.39
TRIM54-202ENST00000380075 DCHS2Q6V1P9 2916 aa17.51■□□□□ 0.39
TRIM54-202ENST00000380075 F6UZH7 168 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 S100A8P05109 93 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 CXCL1P09341 107 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 ZNF674Q2M3X9 581 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 BSXQ3C1V8 233 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 OR4C13Q8NGP0 309 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 GATAD1Q8WUU5 269 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 C1orf159Q96HA4 380 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 URGCP-MRPS24S4R325 110 aa17.5■□□□□ 0.39
TRIM54-202ENST00000380075 TET2Q6N021 2002 aaPredicted RBP17.5■□□□□ 0.39
TRIM54-202ENST00000380075 AP4M1O00189 453 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 SIAH2O43255 324 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 USF1P22415 310 aaPredicted RBP17.49■□□□□ 0.39
TRIM54-202ENST00000380075 ADIRFQ15847 76 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 OR9G1Q8NH87 305 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 NABP2Q9BQ15 211 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 PATZ1Q9HBE1 687 aaKnown RBP17.49■□□□□ 0.39
TRIM54-202ENST00000380075 RHOBP62745 196 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 RPL23P62829 140 aaKnown RBP17.49■□□□□ 0.39
TRIM54-202ENST00000380075 TMEM144Q7Z5S9 345 aa17.49■□□□□ 0.39
TRIM54-202ENST00000380075 PKDREJQ9NTG1 2253 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 TRBV24-1A0A075B6N3 115 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 TGIF2-C20orf24A0A0A6YYL0 155 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 ZNF98A6NK75 572 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 IL3RAP26951 378 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 SPNS3Q6ZMD2 512 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 STPG3Q8N7X2 389 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 ST6GALNAC6Q969X2 333 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 TCEAL7Q9BRU2 100 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 COMMD5Q9GZQ3 224 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 HECTD1Q9ULT8 2610 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 DEFA4P12838 97 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 RPL8P62917 257 aaKnown RBP17.48■□□□□ 0.39
TRIM54-202ENST00000380075 TMEM167AQ8TBQ9 72 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 TNFRSF14Q92956 283 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 FAM210BQ96KR6 192 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 WASHC3Q9Y3C0 194 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 CELSR2Q9HCU4 2923 aa17.48■□□□□ 0.39
TRIM54-202ENST00000380075 A0A1W2PN81 502 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 MYOD1P15172 320 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 CHRNA7P36544 502 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 PRR20EP86478 221 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 PRR20CP86479 221 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 PRR20DP86480 221 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 PRR20BP86481 221 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 PRR20AP86496 221 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 FABP9Q0Z7S8 132 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 NDUFA4L2Q9NRX3 87 aa17.47■□□□□ 0.39
TRIM54-202ENST00000380075 MT-CO2P00403 227 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 IGHV1-8P0DP01 117 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 MC5RP33032 325 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 ERHP84090 104 aaKnown RBP17.46■□□□□ 0.39
TRIM54-202ENST00000380075 KIAA0141Q14154 515 aaPredicted RBP17.46■□□□□ 0.39
TRIM54-202ENST00000380075 SSMEM1Q8WWF3 244 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 ANAPC16Q96DE5 110 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 BAHCC1Q9P281 2608 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 MEOX2P50222 304 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 ABHD5Q8WTS1 349 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 SLC35E1Q96K37 410 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 C12orf57Q99622 126 aa17.46■□□□□ 0.39
TRIM54-202ENST00000380075 A6NNC1 897 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 CLN5O75503 358 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 RNASE2P10153 161 aaKnown RBP17.45■□□□□ 0.38
TRIM54-202ENST00000380075 TGIF2LXQ8IUE1 241 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 MUC15Q8N387 334 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 CACNG8Q8WXS5 425 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 TMEM204Q9BSN7 226 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 DOK5Q9P104 306 aa17.45■□□□□ 0.38
TRIM54-202ENST00000380075 CST9LP1Q5W188 147 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 C19orf24Q9BVV8 132 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 TMEM133Q9H2Q1 129 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 SLC45A2Q9UMX9 530 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 YLPM1P49750 1951 aaKnown RBP17.44■□□□□ 0.38
TRIM54-202ENST00000380075 CENPEQ02224 2701 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 S100PP25815 95 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 GPX4P36969 197 aaPredicted RBP17.44■□□□□ 0.38
TRIM54-202ENST00000380075 C16orf82Q7Z2V1 217 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 OR5B12Q96R08 314 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 ARL2-SNX15V9GYD0 113 aa17.44■□□□□ 0.38
TRIM54-202ENST00000380075 H7BYZ3 331 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 PLAUP00749 431 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 SMIM6P0DI80 62 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 REG1BP48304 166 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 CD69Q07108 199 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 VMA21Q3ZAQ7 101 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 ZNF672Q499Z4 452 aaPredicted RBP17.43■□□□□ 0.38
TRIM54-202ENST00000380075 PNKDQ8N490 385 aa17.43■□□□□ 0.38
TRIM54-202ENST00000380075 RBP4P02753 201 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 LINC00869P0C866 280 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 NPPCP23582 126 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 GCHFRP30047 84 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 LGALS7P47929 136 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 ATP5G3P48201 142 aa17.42■□□□□ 0.38
TRIM54-202ENST00000380075 PPOXP50336 477 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms