RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 TMEM190Q8WZ59 177 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 THYN1Q9P016 225 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
TRAPPC3-202ENST00000373162 TENM2Q9NT68 2774 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 CTDSP2O14595 271 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 SNAPC5O75971 98 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 IGKV1-5P01602 117 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 CASC10Q5T4H9 136 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 OR2C3Q8N628 320 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 TMEM229BQ8NBD8 167 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 UXS1Q8NBZ7 420 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 TP53RKQ96S44 253 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 CHRDL1Q9BU40 450 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 FKBP11Q9NYL4 201 aa13.48□□□□□ -0.25
TRAPPC3-202ENST00000373162 GABARAPH6UMI1 98 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 PI3P19957 117 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 FCGR2BP31994 310 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 MARC2Q969Z3 335 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 BSCL2Q96G97 398 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 CCDC59Q9P031 241 aaKnown RBP13.47□□□□□ -0.25
TRAPPC3-202ENST00000373162 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 I3L2K1 104 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 S100GP29377 79 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 SSBP1Q04837 148 aaKnown RBP13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 SLC25A24Q6NUK1 477 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 PLET1Q6UQ28 207 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 BTNL8Q6UX41 500 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 DEFB125Q8N687 156 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 C15orf40Q8WUR7 153 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 SMIM4Q8WVI0 70 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 C21orf62Q9NYP8 219 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
TRAPPC3-202ENST00000373162 TRAV25A0A0B4J276 109 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 CTDSPLO15194 276 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 UCP1P25874 307 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 PIGPP57054 158 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 SPSB3Q6PJ21 355 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 H2BFWTQ7Z2G1 175 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR1L6Q8NGR2 347 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 TERB2Q8NHR7 220 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 HINT2Q9BX68 163 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 PALMDQ9NP74 551 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 SLC2A8Q9NY64 477 aa13.45□□□□□ -0.26
TRAPPC3-202ENST00000373162 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 A0A0B4J293 547 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 NDUFA4O00483 81 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 CYB5BO43169 146 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 CTSGP08311 255 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 TAS2R19P59542 299 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 MRPS10P82664 201 aaKnown RBP13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 AARDQ4LEZ3 155 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 STEAP1BQ6NZ63 245 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR13C8Q8NGS7 320 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 SOSTQ9BQB4 213 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 TUBA4BQ9H853 241 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 UFC1Q9Y3C8 167 aa13.44□□□□□ -0.26
TRAPPC3-202ENST00000373162 RAB3DO95716 219 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 IFNA6P05013 189 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 CTSDP07339 412 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 PGAM2P15259 253 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 PPP5CP53041 499 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 SLIRPQ9GZT3 109 aaKnown RBP13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 C5orf66Q9H5L9 145 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 RETNQ9HD89 108 aa13.43□□□□□ -0.26
TRAPPC3-202ENST00000373162 C3orf85A0A1B0GTC6 90 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 A6NHS1 94 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 K7EMT4 169 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 FAAP20Q6NZ36 180 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 LYSTQ99698 3801 aa13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 RTBDNQ9BSG5 229 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 DAZ1Q9NQZ3 744 aaKnown RBP13.42□□□□□ -0.26
TRAPPC3-202ENST00000373162 TSPAN4O14817 238 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms