RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 LINC01590Q5TEZ4 76 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 COQ2Q96H96 371 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
CHST3-201ENST00000373115 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 SRSF3P84103 164 aaKnown RBP13.16□□□□□ -0.3
CHST3-201ENST00000373115 PTPRFP10586 1907 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
CHST3-201ENST00000373115 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.3
CHST3-201ENST00000373115 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 LINC00587B1AMM8 73 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
CHST3-201ENST00000373115 CD7P09564 240 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 ARPC1AQ92747 370 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 ATAD5Q96QE3 1844 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 SLC25A20O43772 301 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
CHST3-201ENST00000373115 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
CHST3-201ENST00000373115 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 C12orf77C9JDV5 145 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 EGR4Q05215 589 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 LAMTOR2Q9Y2Q5 125 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 UCNP55089 124 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 LHFPL4Q7Z7J7 247 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
CHST3-201ENST00000373115 DPH3P1Q9H4G8 78 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 ELOVL5Q9NYP7 299 aa13.15□□□□□ -0.3
CHST3-201ENST00000373115 DEFB104AQ8WTQ1 72 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 A6NNC1 897 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
CHST3-201ENST00000373115 TMEM42Q69YG0 159 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 VCX2Q9H322 139 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 PRR32B1ATL7 298 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
CHST3-201ENST00000373115 OR13A1Q8NGR1 328 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 GDF15Q99988 308 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 FOXH1O75593 365 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 RPL23P62829 140 aaKnown RBP13.14□□□□□ -0.31
CHST3-201ENST00000373115 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 C5orf30Q96GV9 206 aa13.14□□□□□ -0.31
CHST3-201ENST00000373115 CELA3AP09093 270 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 PDCD11Q14690 1871 aaKnown RBP13.13□□□□□ -0.31
CHST3-201ENST00000373115 TIAF1O95411 115 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 CD55P08174 381 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 RFPL3SP0C7P2 107 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 COX5BP10606 129 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 FAM27E3Q08E93 113 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 FAM216BQ8N7L0 139 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 IGKV1D-43A0A0B4J1Z2 117 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 C1QTNF9P0C862 333 aa13.13□□□□□ -0.31
CHST3-201ENST00000373115 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
CHST3-201ENST00000373115 LHX2P50458 406 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
CHST3-201ENST00000373115 SLC25A15Q9Y619 301 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 SRD5A1P18405 259 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
CHST3-201ENST00000373115 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 SHISA3A0PJX4 238 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 B9A039 149 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 COL11A1P12107 1806 aaPredicted RBP13.12□□□□□ -0.31
CHST3-201ENST00000373115 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
CHST3-201ENST00000373115 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 SIGLEC12Q96PQ1 595 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 TRAV14DV4A0A0A6YYC5 116 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 RIPPLY2Q5TAB7 128 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 TFF1P04155 84 aa13.12□□□□□ -0.31
CHST3-201ENST00000373115 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 FDCSPQ8NFU4 85 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 CHTOPQ9Y3Y2 248 aaKnown RBP13.11□□□□□ -0.31
CHST3-201ENST00000373115 CD24P25063 80 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 TMEM155Q4W5P6 130 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 FAM181AQ8N9Y4 354 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
CHST3-201ENST00000373115 A0A087WWC5 75 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 STHQ8IWL8 128 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 KIR3DL3Q8N743 410 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 SPSB2Q99619 263 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
CHST3-201ENST00000373115 IFI27P40305 119 aaPredicted RBP13.1□□□□□ -0.31
CHST3-201ENST00000373115 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 NXT2Q9NPJ8 142 aaKnown RBP13.1□□□□□ -0.31
CHST3-201ENST00000373115 DEPPQ9NTK1 212 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 DPM2O94777 84 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 DPM3Q9P2X0 92 aa13.1□□□□□ -0.31
CHST3-201ENST00000373115 PILRBQ9UKJ0 227 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms