RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FAM90A15PP0C7V4 464 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 FAM90A13PP0C7W8 464 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 FAM90A14PP0C7W9 464 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 FAM90A24PP0C7X0 464 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 COX5BP10606 129 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 PF4V1P10720 104 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 ZNF525Q8N782 197 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM171Q8WVE6 324 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 RBM14Q96PK6 669 aaKnown RBP7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM208Q9BTX3 173 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 DCAF16Q9NXF7 216 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 RNF24Q9Y225 148 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 AMMECR1Q9Y4X0 333 aaPredicted RBP7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 IGHV1-69-2A0A0G2JMI3 117 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 APCSP02743 223 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 SMIM6P0DI80 62 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 ANAPC16Q96DE5 110 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 PERPQ96FX8 193 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 ASCL2Q99929 193 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 LIME1Q9H400 295 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
SMARCA1-202ENST00000371122 TRBV6-7A0A0A0MS04 114 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 AMY1AP04745 511 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 IL6RP08887 468 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 RELBQ01201 579 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 OR9G1Q8NH87 305 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 ST6GALNAC6Q969X2 333 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 SMIM8Q96KF7 97 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 PMCHL2Q9BQD1 86 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 ATG101Q9BSB4 218 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 B4DEV8 164 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 MGPP08493 103 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 OR9G9P0C7N8 305 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 FOSL1P15407 271 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 CD82P27701 267 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 HINT1P49773 126 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM183BQ1AE95 376 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM177Q53S58 311 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 UNQ5815/PRO19632Q6UWF5 114 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 SRSF12Q8WXF0 261 aaKnown RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 RNASE7Q9H1E1 156 aaKnown RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 GOLT1BQ9Y3E0 138 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 ZNF503-AS2A6NEH8 195 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 PYYP10082 97 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 GCHFRP30047 84 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 LHFPL1Q86WI0 220 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM45BQ96B21 275 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 HIGD1AQ9Y241 93 aa7.6□□□□□ -1.19
SMARCA1-202ENST00000371122 SAA2-SAA4A0A096LPE2 208 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 LINC00587B1AMM8 73 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 IL4P05112 153 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 SAA2P0DJI9 122 aaPredicted RBP7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 SMIM17P0DL12 118 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 GNG5P63218 68 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 ZNF841Q6ZN19 808 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 MMD2Q8IY49 270 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 SAXO1Q8IYX7 474 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 KLHDC1Q8N7A1 406 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 LOXL4Q96JB6 756 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 DERL1Q9BUN8 251 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 GGACTQ9BVM4 153 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 TMEM106BQ9NUM4 274 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 LOC400499M0QZD8 3231 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 IGHV1-18A0A0C4DH31 117 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 CCL1P22362 96 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 KIR2DL2P43627 348 aaPredicted RBP7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 UQCRFS1P47985 274 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 TIMM23BQ5SRD1 257 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 OR1P1Q8NH06 330 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 RNF115Q9Y4L5 304 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 ABCA12Q86UK0 2595 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 WDFY4Q6ZS81 3184 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 IGLV3-32A0A0A0MS00 114 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 TRAV5A0A0B4J249 113 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 C8orf88P0DMB2 117 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 BRS3P32247 399 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 QRFPP83859 136 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 LRRC75BQ2VPJ9 315 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 KLF17Q5JT82 389 aaPredicted RBP7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 NEUROG1Q92886 237 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 SEMA5BQ9P283 1151 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 JPT1Q9UK76 154 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 RAXQ9Y2V3 346 aa7.59□□□□□ -1.19
SMARCA1-202ENST00000371122 RBFOX2O43251 390 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 S100A7P31151 101 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 ID3Q02535 119 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 ICAM4Q14773 271 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 CSRP2Q16527 193 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 ASPHD1Q5U4P2 390 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4C13Q8NGP0 309 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4A5Q8NH83 315 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 LSM10Q969L4 123 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 SSBP4Q9BWG4 385 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms