RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GADD45GO95257 159 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 SOX14O95416 240 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 COX4I1P13073 169 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 GNG3P63215 75 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 DYNC1I2Q13409 638 aaKnown RBP3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 GPR107Q5VW38 600 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 PLCXD3Q63HM9 321 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 TMEM42Q69YG0 159 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 PLET1Q6UQ28 207 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 RASSF6Q6ZTQ3 369 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 CYP4Z1Q86W10 505 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 ANGPTL5Q86XS5 388 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OSR2Q8N2R0 312 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF561Q8N587 486 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 C8orf31Q8N9H6 132 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR5A2Q8NGI9 324 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR13D1Q8NGV5 346 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR6K6Q8NGW6 343 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR6N2Q8NGY6 317 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 OTOSQ8NHW6 89 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 GNPDA2Q8TDQ7 276 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 GPX8Q8TED1 209 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 PYURFQ96I23 114 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 TEAD3Q99594 435 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 TSSK6Q9BXA6 273 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 PARP12Q9H0J9 701 aaKnown RBP3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 RGCCQ9H4X1 137 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 FGFR1OP2Q9NVK5 253 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 ARMC1Q9NVT9 282 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 FAM206AQ9NX38 181 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 RASL12Q9NYN1 266 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 LINC00527Q9UJ94 153 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 FAM32AQ9Y421 112 aaKnown RBP3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 FRAS1Q86XX4 4008 aa3.54□□□□□ -1.84
RNU4-39P-201ENST00000362455 A0A1B0GTI1 187 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 PQLC2LA1A4F0 135 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 A6NIN4 97 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 NCBP2LA6PVI3 153 aaKnown RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 MAGEB4O15481 346 aaPredicted RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 HBE1P02100 147 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 RBP4P02753 201 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 EIF4EP06730 217 aaKnown RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 ALOX5APP20292 161 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 CFL1P23528 166 aaKnown RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 HSD11B1P28845 292 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 MYCNOSP40205 109 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 HAAOP46952 286 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR12D2P58182 307 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 PSME3P61289 254 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 ERCC8Q13216 396 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 DIAPH2-AS1Q14236 149 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 DEFB136Q30KP8 78 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 MINOS1Q5TGZ0 78 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZFAND6Q6FIF0 208 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 Q6P435 159 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 LINC01551Q86U37 167 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 ENTHD1Q8IYW4 607 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 Q8N9L7 120 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR4X2Q8NGF9 303 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 OR51E1Q8TCB6 317 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 THEM6Q8WUY1 208 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 APH1BQ8WW43 257 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 DYDC1Q8WWB3 177 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 GALNT14Q96FL9 552 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 HOPXQ9BPY8 73 aaPredicted RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 SIKE1Q9BRV8 207 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 ZNF649Q9BS31 505 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 TMEM133Q9H2Q1 129 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 GPR84Q9NQS5 396 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 CMC2Q9NRP2 79 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 RCL1Q9Y2P8 373 aaKnown RBP3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
RNU4-39P-201ENST00000362455 J3QT63 122 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 NRASP01111 189 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 APOC1P02654 83 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 TTRP02766 147 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 HTR1DP28221 377 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 NUDT2P50583 147 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 EDDM3BP56851 147 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 SMIM11AP58511 58 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 MAPRE2Q15555 327 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 SMIM21Q3B7S5 101 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ARPINQ7Z6K5 226 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF695Q8IW36 515 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF676Q8N7Q3 588 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ASCC1Q8N9N2 400 aaKnown RBP3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 NDNFQ8TB73 568 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 FAM104AQ969W3 186 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 MRGPRFQ96AM1 343 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF714Q96N38 554 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 NIPSNAP1Q9BPW8 284 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 PBOV1Q9GZY1 135 aa3.52□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR51V1Q9H2C8 321 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms