RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PPP5CP53041 499 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 MZT2AQ6P582 158 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 CADM3Q8N126 398 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 SCARB1Q8WTV0 552 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 ZMAT4Q9H898 229 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 TGOLN2O43493 480 aa12.53□□□□□ -0.4
PDLIM7-201ENST00000355572 SCAF4O95104 1147 aaKnown RBP12.53□□□□□ -0.4
PDLIM7-201ENST00000355572 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
PDLIM7-201ENST00000355572 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
PDLIM7-201ENST00000355572 SLC38A6Q8IZM9 456 aa12.53□□□□□ -0.4
PDLIM7-201ENST00000355572 C3orf84H3BNL1 204 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 CD74P04233 296 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 RND3P61587 244 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 SP6Q3SY56 376 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 TMEM190Q8WZ59 177 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-201ENST00000355572 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 SNAPC5O75971 98 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 PGAM2P15259 253 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 PIGPP57054 158 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 OR5B3Q8NH48 314 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 AP3S1Q92572 193 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
PDLIM7-201ENST00000355572 A0A0B4J293 547 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 I3L2K1 104 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 MARCH1Q8TCQ1 289 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
PDLIM7-201ENST00000355572 RYR2Q92736 4967 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 RGS5O15539 181 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 TPPPO94811 219 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 CTSGP08311 255 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 PRCDQ00LT1 54 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 Q6ZRM9 215 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 HSD17B13Q7Z5P4 300 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 ARRDC1Q8N5I2 433 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 UBAC2Q8NBM4 344 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 THYN1Q9P016 225 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 TENM2Q9NT68 2774 aa12.49□□□□□ -0.41
PDLIM7-201ENST00000355572 LYSTQ99698 3801 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 RAB3DO95716 219 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 SCGB2B2Q4G0G5 96 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-201ENST00000355572 C3orf85A0A1B0GTC6 90 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 MT-CO2P00403 227 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 IFNA6P05013 189 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 Q56UQ5 140 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 TERB2Q8NHR7 220 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 MRPL27Q9P0M9 148 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
PDLIM7-201ENST00000355572 SACSQ9NZJ4 4579 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 IGHV3-49A0A0A0MS15 119 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 TBPP20226 339 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 UCP1P25874 307 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms