RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PRR20AP86496 221 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 TMEM241Q24JQ0 296 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 STPG3Q8N7X2 389 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 OR10W1Q8NGF6 305 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 CACNG8Q8WXS5 425 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 SMIM7Q9BQ49 75 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 SLC45A2Q9UMX9 530 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 PRELID1Q9Y255 219 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
SAMM50-201ENST00000350028 BUB1B-PAK6H3BSN5 160 aa13.49□□□□□ -0.25
SAMM50-201ENST00000350028 ENSAO43768 121 aaKnown RBP13.49□□□□□ -0.25
SAMM50-201ENST00000350028 LIPFP07098 398 aa13.49□□□□□ -0.25
SAMM50-201ENST00000350028 CD69Q07108 199 aa13.49□□□□□ -0.25
SAMM50-201ENST00000350028 DTX2Q86UW9 622 aa13.49□□□□□ -0.25
SAMM50-201ENST00000350028 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
SAMM50-201ENST00000350028 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
SAMM50-201ENST00000350028 SOD3P08294 240 aa13.48□□□□□ -0.25
SAMM50-201ENST00000350028 AGAP20933 346 aa13.48□□□□□ -0.25
SAMM50-201ENST00000350028 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
SAMM50-201ENST00000350028 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
SAMM50-201ENST00000350028 SLC35E1Q96K37 410 aa13.48□□□□□ -0.25
SAMM50-201ENST00000350028 CTDSP1Q9GZU7 261 aa13.48□□□□□ -0.25
SAMM50-201ENST00000350028 SAV1Q9H4B6 383 aaPredicted RBP13.48□□□□□ -0.25
SAMM50-201ENST00000350028 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
SAMM50-201ENST00000350028 CGB1A6NKQ9 187 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 C11orf94C9JXX5 98 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 SLC25A17O43808 307 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 PDE6DO43924 150 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 LINC00869P0C866 280 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 GAMTQ14353 236 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 SPNS3Q6ZMD2 512 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 MRPL41Q8IXM3 137 aaKnown RBP13.47□□□□□ -0.25
SAMM50-201ENST00000350028 RNASEH2CQ8TDP1 164 aaKnown RBP13.47□□□□□ -0.25
SAMM50-201ENST00000350028 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 PARLQ9H300 379 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 E7EUB6 86 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 F6UZH7 168 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 ARL14EPLP0DKL9 152 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 ZNF674Q2M3X9 581 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 MMD2Q8IY49 270 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 ZFP82Q8N141 532 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 RPUSD4Q96CM3 377 aaKnown RBP13.47□□□□□ -0.25
SAMM50-201ENST00000350028 CHODLQ9H9P2 273 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 CHD6Q8TD26 2715 aa13.47□□□□□ -0.25
SAMM50-201ENST00000350028 CLDN34H7C241 214 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 TSPAN9O75954 239 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 MT-CO2P00403 227 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 ELOBQ15370 118 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 MOB3BQ86TA1 216 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 C19orf24Q9BVV8 132 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 ONECUT1Q9UBC0 465 aa13.46□□□□□ -0.25
SAMM50-201ENST00000350028 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 LY6HO94772 140 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 CRYGBP07316 175 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 COX7A1P24310 79 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 OR10J1P30954 320 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 RND2P52198 227 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 WT1-ASQ06250 92 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 MRGPRG-AS1Q2M3A8 158 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 SLC16A13Q7RTY0 426 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 PNKDQ8N490 385 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 RPEQ96AT9 228 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 RITA1Q96K30 269 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 RNF5Q99942 180 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 TNCP24821 2201 aa13.45□□□□□ -0.26
SAMM50-201ENST00000350028 C22orf46C9J442 243 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 LY6LH3BQJ8 138 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 GCHFRP30047 84 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 DLX1P56177 255 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 ADIRFQ15847 76 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 PRSS8Q16651 343 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 MLANAQ16655 118 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 CST9LP1Q5W188 147 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 M0R1W7 72 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 CLN5O75503 358 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 VENTXO95231 258 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 UBE2G2P60604 165 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 RPL23P62829 140 aaKnown RBP13.44□□□□□ -0.26
SAMM50-201ENST00000350028 PSG5Q15238 335 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 Q8WTZ3 238 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 ITLN2Q8WWU7 325 aaPredicted RBP13.44□□□□□ -0.26
SAMM50-201ENST00000350028 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
SAMM50-201ENST00000350028 TPSG1Q9NRR2 321 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 KLF2Q9Y5W3 355 aaPredicted RBP13.44□□□□□ -0.26
SAMM50-201ENST00000350028 MALRD1Q5VYJ5 2156 aa13.44□□□□□ -0.26
SAMM50-201ENST00000350028 ADGRG4Q8IZF6 3080 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 LOC105371242A0A075B767 164 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 IGKV1OR2-108A0A075B7D4 117 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 A0A1W2PPI3 338 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 PRB1P04280 392 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms