RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 BUB1B-PAK6H3BSN5 160 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 LY86O95711 162 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 IGKV1-5P01602 117 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 SERPINE2P07093 398 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 REG1BP48304 166 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 SPCS3P61009 180 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 LOXL1Q08397 574 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-201ENST00000343575 CATR1Q13166 79 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-201ENST00000343575 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 ZNF695Q8IW36 515 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 TMEM186Q96B77 213 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 Q96MF0 132 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 S1PR3Q99500 378 aa11.88□□□□□ -0.51
CXCL12-201ENST00000343575 MRPL20Q9BYC9 149 aaKnown RBP11.88□□□□□ -0.51
CXCL12-201ENST00000343575 ZNF469Q96JG9 3925 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1B0GU03 582 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1B0GV50 99 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 TOX4O94842 621 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 S1PR2O95136 353 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 MSMBP08118 114 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 PRRX1P54821 245 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ZNF816Q0VGE8 651 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ZNF124Q15973 351 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 IZUMO4Q1ZYL8 232 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 PCGF1Q9BSM1 259 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1B0GV90 55 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 FCGR3BO75015 233 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 IFNA5P01569 189 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 FABP4P15090 132 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ID3Q02535 119 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 HNF4GQ14541 408 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
CXCL12-201ENST00000343575 Q6ZRM9 215 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 LHFPL4Q7Z7J7 247 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 TCTEX1D1Q8N7M0 179 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 FRZBQ92765 325 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
CXCL12-201ENST00000343575 ZANQ9Y493 2812 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 GCGP01275 180 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 IFNA1P01562 189 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 P0C879 139 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 SLC25A6P12236 298 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 VDAC1P21796 283 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 THBS3P49746 956 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 FAM71F2Q6NXP2 309 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 OR5AN1Q8NGI8 311 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 AJUBAQ96IF1 538 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 SRD5A3Q9H8P0 318 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 B4DSR2 109 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 H0YJW9 148 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.51
CXCL12-201ENST00000343575 BCL2P10415 239 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 DYNLT3P51808 116 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 CEBPGP53567 150 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 MBD3L1Q8WWY6 194 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 GPR146Q96CH1 333 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 RHOVQ96L33 236 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 PHOX2AO14813 284 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 SSSCA1O60232 199 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 PSMG3Q9BT73 122 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-201ENST00000343575 SDF2L1Q9HCN8 221 aa11.85□□□□□ -0.51
CXCL12-201ENST00000343575 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 KRASP01116 189 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 AVPP01185 164 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 G6PCP35575 357 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 DYNAPQ8N1N2 210 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 LHX4Q969G2 390 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 LSM10Q969L4 123 aaKnown RBP11.84□□□□□ -0.51
CXCL12-201ENST00000343575 RAB40CQ96S21 281 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
CXCL12-201ENST00000343575 ITPR3Q14573 2671 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 ABCA1O95477 2261 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 CENPVL3A0A0U1RRI6 287 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 A0A1W2PPI3 338 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
CXCL12-201ENST00000343575 A8MWP6 167 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 HPRT1P00492 218 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms