RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ELOVL5Q9NYP7 299 aa9.96□□□□□ -0.82
SHANK2-201ENST00000338508 SCN7AQ01118 1682 aa9.96□□□□□ -0.82
SHANK2-201ENST00000338508 C1QTNF12Q5T7M4 302 aa9.96□□□□□ -0.82
SHANK2-201ENST00000338508 ZNF600Q6ZNG1 722 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 TTC9CQ8N5M4 171 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
SHANK2-201ENST00000338508 RFPL3SP0C7P2 107 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 CD28P10747 220 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 ABCA4P78363 2273 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 PRSS23O95084 383 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 GZMBP10144 247 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 ZNF345Q14585 488 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 Q9H3A6 140 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 SAP25Q8TEE9 199 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 IGKV1-8A0A0C4DH67 115 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 IFI27P40305 119 aaPredicted RBP9.95□□□□□ -0.82
SHANK2-201ENST00000338508 TBR1Q16650 682 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 JPT2Q9H910 190 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 ST20Q9HBF5 79 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 SPTA1P02549 2419 aa9.95□□□□□ -0.82
SHANK2-201ENST00000338508 RNF182Q8N6D2 247 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 PKIBQ9C010 78 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 CELA3BP08861 270 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 SRSF6Q13247 344 aaKnown RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 OR13A1Q8NGR1 328 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 C5orf66Q9H5L9 145 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 FNDC4Q9H6D8 234 aaPredicted RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 NGFRP08138 427 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 RPL32P62910 135 aaKnown RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 ACP7Q6ZNF0 438 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 SEPSECSQ9HD40 501 aaKnown RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 MYO7BQ6PIF6 2116 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 PAPPAQ13219 1627 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 SLC25A2Q9BXI2 301 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 CCL3L1P16619 93 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 OR52E5Q8NH55 327 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 COQ2Q96H96 371 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 PRSS22Q9GZN4 317 aa9.94□□□□□ -0.82
SHANK2-201ENST00000338508 PEF1Q9UBV8 284 aaKnown RBP9.94□□□□□ -0.82
SHANK2-201ENST00000338508 A0A087WX48 190 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 TRAV40A0A0B4J280 105 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 CECR9P0C854 216 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 SRSF4Q08170 494 aaKnown RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 DTX2Q86UW9 622 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 LAMTOR3Q9UHA4 124 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 DDTP30046 118 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 ZP1P60852 638 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 EGR4Q05215 589 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 NEUROG1Q92886 237 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 LOXL4Q96JB6 756 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 FAM206AQ9NX38 181 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 C5orf67F2Z3F1 127 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 TCF23Q7RTU1 214 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 PUSL1Q8N0Z8 303 aaKnown RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 DOCK3Q8IZD9 2030 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.93□□□□□ -0.82
SHANK2-201ENST00000338508 MIR17HGQ75NE6 70 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 OR5P3Q8WZ94 311 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 ZNF257Q9Y2Q1 563 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 NHSL1Q5SYE7 1610 aa9.93□□□□□ -0.82
SHANK2-201ENST00000338508 HLA-DQB1P01920 261 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 SPSB2Q99619 263 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 DERL1Q9BUN8 251 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 TRAV14DV4A0A0A6YYC5 116 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 GGTLC3B5MD39 225 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 ADAMTSL1Q8N6G6 1762 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 VENTXO95231 258 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 SUMO4Q6EEV6 95 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 ASPHD2Q6ICH7 369 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 C1orf122Q6ZSJ8 110 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 Q6ZT83 130 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 ZIC4Q8N9L1 334 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 TMEM54Q969K7 222 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 TRIOBPQ9H2D6 2365 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 PAX1P15863 534 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 AQP3Q92482 292 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 RNASE7Q9H1E1 156 aaKnown RBP9.92□□□□□ -0.82
SHANK2-201ENST00000338508 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 EPOPA6NHQ4 379 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 C17orf98A8MV24 154 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 A0A0G2JMM0 328 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 A0A1W2PPB8 328 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 A0A1W2PRS3 328 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 KIR3DP1A8MWS1 328 aa9.92□□□□□ -0.82
SHANK2-201ENST00000338508 UMODP07911 640 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms