RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 COL6A6A6NMZ7 2263 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 THSD7BQ9C0I4 1608 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 FNDC1Q4ZHG4 1894 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 C5orf52A6NGY3 159 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 C15orf61A6NNL5 157 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 SLC17A3O00476 420 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 STAG3L2P0CL84 134 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 FHL1Q13642 323 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 REC114Q7Z4M0 266 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 LINC01560Q8TB33 94 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 WFIKKN1Q96NZ8 548 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 CYTL1Q9NRR1 136 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 THADAQ6YHU6 1953 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 HINT1P49773 126 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 CX3CL1P78423 397 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 QRFPP83859 136 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 TMEM42Q69YG0 159 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 OR52E5Q8NH55 327 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 IGKV1-27A0A075B6S5 117 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 FAM90A9PA6NNJ1 464 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 FOXG1P55316 489 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 RELQ04864 619 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 TBR1Q16650 682 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 DUTP33316 252 aaKnown RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 RTN4RL2Q86UN3 420 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 SAA2-SAA4A0A096LPE2 208 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 SAA2P0DJI9 122 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 ABHD17AQ96GS6 310 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 HEATR1Q9H583 2144 aaKnown RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 WFDC1Q9HC57 220 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 DOCK8Q8NF50 2099 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 RAMP3O60896 148 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 PHLDA3Q9Y5J5 127 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 SOX21Q9Y651 276 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 MYO7BQ6PIF6 2116 aa14.29□□□□□ -0.12
TRAPPC11-201ENST00000334690 CCL20P78556 96 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 SRSF4Q08170 494 aaKnown RBP14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 MIR17HGQ75NE6 70 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 CBLN4Q9NTU7 201 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 DCAF16Q9NXF7 216 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 DIDO1Q9BTC0 2240 aaKnown RBP14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 PTPRDP23468 1912 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 DPRXA6NFQ7 191 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 E9PQ18 207 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 SAA1P0DJI8 122 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 CFPP27918 469 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 EEF1AKMT3Q96AZ1 226 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 OR4C46A6NHA9 309 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 ATP5G2Q06055 141 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 NEU4Q8WWR8 484 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 SPRR3Q9UBC9 169 aa14.28□□□□□ -0.12
TRAPPC11-201ENST00000334690 TCF21O43680 179 aa14.27□□□□□ -0.12
TRAPPC11-201ENST00000334690 CD55P08174 381 aa14.27□□□□□ -0.12
TRAPPC11-201ENST00000334690 CGB1A6NKQ9 187 aa14.27□□□□□ -0.12
TRAPPC11-201ENST00000334690 ZNF502Q8TBZ5 544 aa14.27□□□□□ -0.12
TRAPPC11-201ENST00000334690 CACNA1BQ00975 2339 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 TRAV1-1A0A0B4J248 108 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 TMEM238LA0A1B0GVL6 79 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 A6NJY4 79 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 M0R3E3 92 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 SOD3P08294 240 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 CSRP1P21291 193 aaKnown RBP14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 SYT8Q8NBV8 401 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 SRRM5B3KS81 715 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 FOXA3P55318 350 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 GPR82Q96P67 336 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 PIMREGQ9BSJ6 248 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 CLDN16Q9Y5I7 305 aa14.27□□□□□ -0.13
TRAPPC11-201ENST00000334690 TSC2P49815 1807 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 CCL3L1P16619 93 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 GSN-AS1Q9NRJ2 163 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 C21orf62Q9NYP8 219 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 CD59P13987 128 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 SMAGPQ0VAQ4 97 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 A0A1B0GUT8 65 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 MBNL2Q5VZF2 373 aaKnown RBP14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 DOCK7Q96N67 2140 aa14.26□□□□□ -0.13
TRAPPC11-201ENST00000334690 A0A1W2PRE2 83 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 ZNF207O43670 478 aaKnown RBP14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 PDLIM4P50479 330 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 IGHV1-18A0A0C4DH31 117 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 GATA2P23769 480 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 TFPI2P48307 235 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 PLAURQ03405 335 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 OR1N2Q8NGR9 330 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 IGHV3-35A0A0C4DH35 117 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 DLX6P56179 175 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 Q6AWC8 147 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 FOXL2NBQ6ZUU3 175 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 ATP5J2P56134 94 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 TMEM170AQ8WVE7 144 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 TMEM242Q9NWH2 141 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 ZNF407Q9C0G0 2248 aa14.25□□□□□ -0.13
TRAPPC11-201ENST00000334690 C5orf63A6NC05 138 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 GAGE10A6NGK3 116 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 SIAH2O43255 324 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 PRCDQ00LT1 54 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 CD69Q07108 199 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms