RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ZNF2Q9BSG1 426 aaPredicted RBP12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 HINT2Q9BX68 163 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 C21orf62Q9NYP8 219 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 TP53TG1Q9Y2A0 90 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 F11RQ9Y624 299 aaKnown RBP12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 K7EIM0 57 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 NDUFA4O00483 81 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 CYB5BO43169 146 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 LY6G6CO95867 125 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 KRASP01116 189 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 PMP2P02689 132 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 BMI1P35226 326 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 G6PCP35575 357 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 TGFBR1P36897 503 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 APOC4P55056 127 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 ERVK-16P61578 105 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 SPSB3Q6PJ21 355 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 LINC00299Q6ZSB3 139 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 HSD17B13Q7Z5P4 300 aaPredicted RBP12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 C20orf24Q9BUV8 137 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 ANAPC10Q9UM13 185 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 OR51B2Q9Y5P1 312 aa12.92□□□□□ -0.34
EXOSC4-201ENST00000316052 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 RPL35AP18077 110 aaKnown RBP12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 LAMTOR1Q6IAA8 161 aa12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 LSM10Q969L4 123 aaKnown RBP12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 RNF183Q96D59 192 aa12.91□□□□□ -0.34
EXOSC4-201ENST00000316052 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 K7EMT4 169 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 UBE2CO00762 179 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 CTSGP08311 255 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 NAT1P18440 290 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 LYSMD2Q8IV50 215 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 CADM3Q8N126 398 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 BORCS5Q969J3 196 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
EXOSC4-201ENST00000316052 NUPR2A6NF83 97 aa12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 SNAPC5O75971 98 aa12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 RPS19P39019 145 aaKnown RBP12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 STPG3Q8N7X2 389 aa12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 FXYD6Q9H0Q3 95 aa12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
EXOSC4-201ENST00000316052 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 C15orf62A8K5M9 175 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 TMEM127O75204 238 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 TAS2R20P59543 309 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 ZNF124Q15973 351 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 Q56UQ5 140 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 APRG1Q8IVJ8 170 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 RNF2Q99496 336 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
EXOSC4-201ENST00000316052 GPR31O00270 319 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 CHEK1O14757 476 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 SPCS2Q15005 226 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 UBE2NLQ5JXB2 153 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 TMEM69Q5SWH9 247 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 CMTM1Q8IZ96 169 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
EXOSC4-201ENST00000316052 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 I3L2K1 104 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 HLA-DMAP28067 261 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 HRH1P35367 487 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 TAS2R46P59540 309 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 OR1P1Q8NH06 330 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 DYNC2LI1Q8TCX1 351 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 FKBP11Q9NYL4 201 aa12.86□□□□□ -0.35
EXOSC4-201ENST00000316052 IGHV7-4-1A0A0J9YVY3 117 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 C15orf61A6NNL5 157 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 ZNF182P17025 639 aaPredicted RBP12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 PRSS3P35030 304 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 VBP1P61758 197 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 NCS1P62166 190 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 SLC25A46Q96AG3 418 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 SEC22AQ96IW7 307 aa12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 OR10C1Q96KK4 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms