RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 OR4F17Q8NGA8 305 aa17.36■□□□□ 0.37
HOXD4-201ENST00000306324 OR1S1Q8NH92 325 aa17.36■□□□□ 0.37
HOXD4-201ENST00000306324 OR4F4Q96R69 305 aa17.36■□□□□ 0.37
HOXD4-201ENST00000306324 PKD1L1Q8TDX9 2849 aa17.36■□□□□ 0.37
HOXD4-201ENST00000306324 C13orf42A0A1B0GVH6 325 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 OR2J3O76001 311 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 PTTG1O95997 202 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 IFNA21P01568 189 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 SPCS3P61009 180 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 AARDQ4LEZ3 155 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 C4orf3Q8WVX3 66 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 MARVELD1Q9BSK0 173 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 ENY2Q9NPA8 101 aa17.35■□□□□ 0.37
HOXD4-201ENST00000306324 A0A0G2JLM5 398 aa17.34■□□□□ 0.37
HOXD4-201ENST00000306324 IL5P05113 134 aa17.34■□□□□ 0.37
HOXD4-201ENST00000306324 ERHP84090 104 aaKnown RBP17.34■□□□□ 0.37
HOXD4-201ENST00000306324 DEFB136Q30KP8 78 aa17.34■□□□□ 0.37
HOXD4-201ENST00000306324 OR52E5Q8NH55 327 aa17.34■□□□□ 0.37
HOXD4-201ENST00000306324 TRBV9A0A0B4J1U6 114 aa17.33■□□□□ 0.37
HOXD4-201ENST00000306324 C12orf45Q8N5I9 185 aaPredicted RBP17.33■□□□□ 0.37
HOXD4-201ENST00000306324 OR2C3Q8N628 320 aa17.33■□□□□ 0.37
HOXD4-201ENST00000306324 NECAP1Q8NC96 275 aa17.33■□□□□ 0.37
HOXD4-201ENST00000306324 FANCD2OSQ96PS1 177 aa17.33■□□□□ 0.37
HOXD4-201ENST00000306324 GPN1Q9HCN4 374 aaPredicted RBP17.33■□□□□ 0.37
HOXD4-201ENST00000306324 CACFD1Q9UGQ2 172 aa17.33■□□□□ 0.37
HOXD4-201ENST00000306324 FAM223BA6NKX1 122 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 CEBPZOSA8MTT3 80 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 SLC25A6P12236 298 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 HIST1H1BP16401 226 aaKnown RBP17.32■□□□□ 0.36
HOXD4-201ENST00000306324 SLC25A24Q6NUK1 477 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 FAM223AQ8IWN6 122 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 USMG5Q96IX5 58 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 DUX3Q96PT4 197 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 FBXL7Q9UJT9 491 aa17.32■□□□□ 0.36
HOXD4-201ENST00000306324 F11RQ9Y624 299 aaKnown RBP17.32■□□□□ 0.36
HOXD4-201ENST00000306324 IGLV11-55A0A075B6I3 123 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 MPTX1A8MV57 137 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 CYB5BO43169 146 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 PRAF2O60831 178 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 PF4P02776 101 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 LGALS1P09382 135 aaKnown RBP17.31■□□□□ 0.36
HOXD4-201ENST00000306324 SNCAP37840 140 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 TNFRSF9Q07011 255 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 C15orf32Q32M92 178 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 P2RX4Q99571 388 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 DMRT1Q9Y5R6 373 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 I3L521 148 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 PITX3O75364 302 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 ATP5G2Q06055 141 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 PDLIM3Q53GG5 364 aaPredicted RBP17.31■□□□□ 0.36
HOXD4-201ENST00000306324 HEYLQ9NQ87 328 aaPredicted RBP17.31■□□□□ 0.36
HOXD4-201ENST00000306324 HSPB7Q9UBY9 170 aa17.31■□□□□ 0.36
HOXD4-201ENST00000306324 CMYA5Q8N3K9 4069 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 CCSO14618 274 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 NDUFB8O95169 186 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 MFAP2P55001 183 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 OR1P1Q8NH06 330 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 RAX2Q96IS3 184 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 THYN1Q9P016 225 aa17.3■□□□□ 0.36
HOXD4-201ENST00000306324 INS-IGF2F8WCM5 200 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 CCL24O00175 119 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 RUNX1Q01196 453 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 EXOSC2Q13868 293 aaKnown RBP17.29■□□□□ 0.36
HOXD4-201ENST00000306324 RGS21Q2M5E4 152 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 ZNF114Q8NC26 417 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 OR11H1Q8NG94 326 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 OR1L6Q8NGR2 347 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 RBKSQ9H477 322 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 S4R3C0 116 aa17.29■□□□□ 0.36
HOXD4-201ENST00000306324 ANKRD34BA5PLL1 514 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 SNRPGP15A8MWD9 76 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 FAM25EA8MYX2 175 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 IAH1Q2TAA2 248 aaPredicted RBP17.28■□□□□ 0.36
HOXD4-201ENST00000306324 KLK9Q2XQG4 91 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 PRR31Q5SQ13 230 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 ETV3LQ6ZN32 361 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 OR10C1Q96KK4 312 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 HIPK2Q9H2X6 1198 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 KLK9Q9UKQ9 250 aa17.28■□□□□ 0.36
HOXD4-201ENST00000306324 IGHV3-23P01764 117 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 MYCNOSP40205 109 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 C11orf87Q6NUJ2 197 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 OR1N2Q8NGR9 330 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 DTD1Q8TEA8 209 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 DPF1Q92782 380 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 MISP3Q96FF7 219 aa17.27■□□□□ 0.36
HOXD4-201ENST00000306324 FAM90A26D6RGX4 464 aa17.26■□□□□ 0.35
HOXD4-201ENST00000306324 SUB1P53999 127 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXD4-201ENST00000306324 ZNF343Q6P1L6 599 aa17.26■□□□□ 0.35
HOXD4-201ENST00000306324 MAGT1Q9H0U3 335 aa17.26■□□□□ 0.35
HOXD4-201ENST00000306324 GSKIPQ9P0R6 139 aa17.26■□□□□ 0.35
HOXD4-201ENST00000306324 IGHV4OR15-8A0A075B7B6 117 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 A0A087WW49 117 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 IGHV3-21A0A0B4J1V1 117 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 C5orf51A6NDU8 294 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 MFSD2BA6NFX1 497 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 RNASE2P10153 161 aaKnown RBP17.25■□□□□ 0.35
HOXD4-201ENST00000306324 HTR2BP41595 481 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 ZNF616Q08AN1 781 aa17.25■□□□□ 0.35
HOXD4-201ENST00000306324 TATDN3Q17R31 274 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms