RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
FANCA-201ENST00000305699 RBPMS2Q6ZRY4 209 aaKnown RBP11.73□□□□□ -0.53
FANCA-201ENST00000305699 OR1L6Q8NGR2 347 aa11.73□□□□□ -0.53
FANCA-201ENST00000305699 OR52I2Q8NH67 350 aa11.73□□□□□ -0.53
FANCA-201ENST00000305699 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
FANCA-201ENST00000305699 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
FANCA-201ENST00000305699 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
FANCA-201ENST00000305699 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
FANCA-201ENST00000305699 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 CD3DP04234 171 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 PI3P19957 117 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 Q56UQ5 140 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 GPR141Q7Z602 305 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 TMEM190Q8WZ59 177 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
FANCA-201ENST00000305699 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 CSMD3Q7Z407 3707 aa11.72□□□□□ -0.53
FANCA-201ENST00000305699 RGS5O15539 181 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 IGKV1-39P01597 117 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 IGKV1D-39P04432 117 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 PPP5CP53041 499 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 PIGPP57054 158 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 SPSB3Q6PJ21 355 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 OR1P1Q8NH06 330 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
FANCA-201ENST00000305699 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.53
FANCA-201ENST00000305699 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 K7EIM0 57 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 C8orf88P0DMB2 117 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 TBPP20226 339 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 RND3P61587 244 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 DAZ1Q9NQZ3 744 aaKnown RBP11.7□□□□□ -0.54
FANCA-201ENST00000305699 SACSQ9NZJ4 4579 aa11.7□□□□□ -0.54
FANCA-201ENST00000305699 NDUFA4O00483 81 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 AKR1C2P52895 323 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
FANCA-201ENST00000305699 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 SCGB2B2Q4G0G5 96 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 LHFPL1Q86WI0 220 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 ATP6V0BQ99437 205 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 GAR1Q9NY12 217 aaKnown RBP11.69□□□□□ -0.54
FANCA-201ENST00000305699 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 ZNF207O43670 478 aaKnown RBP11.69□□□□□ -0.54
FANCA-201ENST00000305699 RAB3DO95716 219 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 ADMP35318 185 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 TAS2R19P59542 299 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 ERHP84090 104 aaKnown RBP11.69□□□□□ -0.54
FANCA-201ENST00000305699 IZUMO4Q1ZYL8 232 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 TMEM229BQ8NBD8 167 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 OR4D10Q8NGI6 311 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 ZFAND1Q8TCF1 268 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 PINX1Q96BK5 328 aaKnown RBP11.69□□□□□ -0.54
FANCA-201ENST00000305699 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 LYSTQ99698 3801 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
FANCA-201ENST00000305699 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
FANCA-201ENST00000305699 GABARAPH6UMI1 98 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
FANCA-201ENST00000305699 ATG12O94817 140 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 ALDH3B2P48448 385 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 MFAP4P55083 255 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 SPCS2Q15005 226 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 CLVS1Q8IUQ0 354 aaPredicted RBP11.68□□□□□ -0.54
FANCA-201ENST00000305699 CCDC71LQ8N9Z2 235 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
FANCA-201ENST00000305699 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
FANCA-201ENST00000305699 CTDSP2O14595 271 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 YIF1AO95070 293 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 MT-CO2P00403 227 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 SNCAP37840 140 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
FANCA-201ENST00000305699 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 SLC35G3Q8N808 338 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 ZNF114Q8NC26 417 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 OR13C8Q8NGS7 320 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
FANCA-201ENST00000305699 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms