RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 OR4C46A6NHA9 309 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 C15orf61A6NNL5 157 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 K7EMT4 169 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 APOA1P02647 267 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 RCVRNP35243 200 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 RELQ04864 619 aaPredicted RBP12.94□□□□□ -0.34
TFF3-201ENST00000291525 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
TFF3-201ENST00000291525 IGHV3-21A0A0B4J1V1 117 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 K7EIM0 57 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 UBE2CO00762 179 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
TFF3-201ENST00000291525 EIF4EP06730 217 aaKnown RBP12.93□□□□□ -0.34
TFF3-201ENST00000291525 MFAP2P55001 183 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 Q6ZWC4 215 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 CHRDL1Q9BU40 450 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 COMMD3Q9UBI1 195 aa12.93□□□□□ -0.34
TFF3-201ENST00000291525 UCP3P55916 312 aa12.92□□□□□ -0.34
TFF3-201ENST00000291525 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
TFF3-201ENST00000291525 SNX29P2Q8IUI4 249 aa12.92□□□□□ -0.34
TFF3-201ENST00000291525 TXN2Q99757 166 aa12.92□□□□□ -0.34
TFF3-201ENST00000291525 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
TFF3-201ENST00000291525 UBQLN2Q9UHD9 624 aa12.92□□□□□ -0.34
TFF3-201ENST00000291525 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 BMI1P35226 326 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 MFAP4P55083 255 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 WFDC3Q8IUB2 231 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 KIR2DL5BQ8NHK3 375 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
TFF3-201ENST00000291525 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
TFF3-201ENST00000291525 SPRY2O43597 315 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
TFF3-201ENST00000291525 FCGR2BP31994 310 aaPredicted RBP12.9□□□□□ -0.34
TFF3-201ENST00000291525 ADMP35318 185 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
TFF3-201ENST00000291525 PRCDQ00LT1 54 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 STPG3Q8N7X2 389 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 ZNF114Q8NC26 417 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
TFF3-201ENST00000291525 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 CXorf65A6NEN9 183 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 YIF1AO95070 293 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
TFF3-201ENST00000291525 CTSGP08311 255 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 NCS1P62166 190 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 ERHP84090 104 aaKnown RBP12.89□□□□□ -0.35
TFF3-201ENST00000291525 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 FUNDC2Q9BWH2 189 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
TFF3-201ENST00000291525 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 NUPR2A6NF83 97 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 FAM25AB3EWG3 89 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 FAM25CB3EWG5 89 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 FAM25GB3EWG6 89 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 GNG7O60262 68 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 ATG12O94817 140 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 PGAM2P15259 253 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 RORCP51449 518 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
TFF3-201ENST00000291525 VBP1P61758 197 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 TMEM217Q8N7C4 229 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 TMEM116Q8NCL8 245 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 AP3S1Q92572 193 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 MRGPRFQ96AM1 343 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 ZNF486Q96H40 463 aaPredicted RBP12.88□□□□□ -0.35
TFF3-201ENST00000291525 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 DNAH1Q9P2D7 4330 aa12.88□□□□□ -0.35
TFF3-201ENST00000291525 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 I3L2K1 104 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 HPGDSO60760 199 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 MT-CO2P00403 227 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 CD5P06127 495 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 ELK1P19419 428 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 RND3P61587 244 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 RNASE10Q5GAN6 216 aaKnown RBP12.87□□□□□ -0.35
TFF3-201ENST00000291525 LYG2Q86SG7 212 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 PINX1Q96BK5 328 aaKnown RBP12.87□□□□□ -0.35
TFF3-201ENST00000291525 OR10C1Q96KK4 312 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 RNF2Q99496 336 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 RHPN1-AS1Q9BWJ2 59 aa12.87□□□□□ -0.35
TFF3-201ENST00000291525 NXF2Q9GZY0 626 aaKnown RBP12.87□□□□□ -0.35
TFF3-201ENST00000291525 TRAV14DV4A0A0A6YYC5 116 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 CHEK1O14757 476 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 IGKV1-39P01597 117 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 IGKV1D-39P04432 117 aa12.86□□□□□ -0.35
TFF3-201ENST00000291525 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 290 ms