RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 INAFM1C9JVW0 142 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 CHRNA7P36544 502 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 TMEM267Q0VDI3 215 aaPredicted RBP14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 ZNF767PQ75MW2 155 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 OR10W1Q8NGF6 305 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 OR4C12Q96R67 309 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 WFDC1Q9HC57 220 aa14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 HEYLQ9NQ87 328 aaPredicted RBP14.98□□□□□ -0.01
PDLIM3-202ENST00000284770 INS-IGF2F8WCM5 200 aa14.97□□□□□ -0.01
PDLIM3-202ENST00000284770 EXOSC2Q13868 293 aaKnown RBP14.97□□□□□ -0.01
PDLIM3-202ENST00000284770 RPL7L1Q6DKI1 246 aaKnown RBP14.97□□□□□ -0.01
PDLIM3-202ENST00000284770 STX12Q86Y82 276 aa14.97□□□□□ -0.01
PDLIM3-202ENST00000284770 HSPB9Q9BQS6 159 aa14.97□□□□□ -0.01
PDLIM3-202ENST00000284770 METTL15P1P0C7V9 234 aa14.96□□□□□ -0.01
PDLIM3-202ENST00000284770 HAPLN4Q86UW8 402 aa14.96□□□□□ -0.01
PDLIM3-202ENST00000284770 STPG2Q8N412 459 aa14.96□□□□□ -0.01
PDLIM3-202ENST00000284770 ARPC1AQ92747 370 aa14.96□□□□□ -0.01
PDLIM3-202ENST00000284770 SH2D7A6NKC9 451 aaPredicted RBP14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 TEX22C9J3V5 150 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 NDPQ00604 133 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 WT1-ASQ06250 92 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 ARL16Q0P5N6 197 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 TMEM217Q8N7C4 229 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 OR5C1Q8NGR4 320 aa14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 SRSF8Q9BRL6 282 aaKnown RBP14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 STRAPQ9Y3F4 350 aaKnown RBP14.96□□□□□ -0.02
PDLIM3-202ENST00000284770 IGLC7A0M8Q6 106 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 C15orf62A8K5M9 175 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 PMS2P5A8MQ11 134 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 IFNA7P01567 189 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 BLCAPP62952 87 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 ERHP84090 104 aaKnown RBP14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 HSD17B13Q7Z5P4 300 aaPredicted RBP14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 MRPL41Q8IXM3 137 aaKnown RBP14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 UBAC2Q8NBM4 344 aa14.95□□□□□ -0.02
PDLIM3-202ENST00000284770 JTBO76095 146 aa14.94□□□□□ -0.02
PDLIM3-202ENST00000284770 TPT1P13693 172 aaKnown RBP14.94□□□□□ -0.02
PDLIM3-202ENST00000284770 RPP30P78346 268 aaKnown RBP14.94□□□□□ -0.02
PDLIM3-202ENST00000284770 BAP18Q8IXM2 172 aa14.94□□□□□ -0.02
PDLIM3-202ENST00000284770 FAM103A1Q9BTL3 118 aaKnown RBP14.94□□□□□ -0.02
PDLIM3-202ENST00000284770 IFNA10P01566 189 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 OR13C7P0DN81 318 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 CLINT1Q14677 625 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 ALKAL2Q6UX46 152 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 OR1S2Q8NGQ3 325 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 TMEM170AQ8WVE7 144 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 DUX5Q96PT3 197 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 ARV1Q9H2C2 271 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 DNAJC9-AS1A6NH13 148 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 APELAP0DMC3 54 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 EGR2P11161 476 aaPredicted RBP14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 SNCAP37840 140 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 HTR2BP41595 481 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 SLC24A4Q8NFF2 622 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 ZNF418Q8TF45 676 aaPredicted RBP14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 ABHD5Q8WTS1 349 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 PHYHIPLQ96FC7 376 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 UBQLN2Q9UHD9 624 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 FBXO7Q9Y3I1 522 aa14.93□□□□□ -0.02
PDLIM3-202ENST00000284770 LINC01548A6NM66 108 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 CLDN34H7C241 214 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 IGHG2P01859 326 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 AREGP15514 252 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 ATP5IP56385 69 aaPredicted RBP14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 HBG1P69891 147 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 HBG2P69892 147 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 BSXQ3C1V8 233 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 C9orf152Q5JTZ5 239 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 SGMS2Q8NHU3 365 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 SCARB1Q8WTV0 552 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 ESM1Q9NQ30 184 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 PARP11Q9NR21 331 aa14.92□□□□□ -0.02
PDLIM3-202ENST00000284770 ATP6V0E1O15342 81 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 FAM157CP0CG43 387 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 EIF5AP63241 154 aaKnown RBP14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 OR8G2PQ6IF36 304 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 ATP5SQ99766 215 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 PAIP2BQ9ULR5 123 aaKnown RBP14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 MTORP42345 2549 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 F8P00451 2351 aa14.91□□□□□ -0.02
PDLIM3-202ENST00000284770 BORCS7-ASMTA0A0B4J1R7 106 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 CRLF1O75462 422 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 REG1AP05451 166 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 NPY1RP25929 384 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 SLC38A11Q08AI6 406 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 ZNF266Q14584 549 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 C2orf83Q53S99 150 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 ASPHD1Q5U4P2 390 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 Q6ZS46 218 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 LFNGQ8NES3 379 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 NPFFR1Q9GZQ6 430 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 RNASE2P10153 161 aaKnown RBP14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 SUB1P53999 127 aaKnown RBP eCLIP14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 HILS1P60008 231 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 ZNF114Q8NC26 417 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 P2RX4Q99571 388 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 GINS3Q9BRX5 216 aa14.9□□□□□ -0.02
PDLIM3-202ENST00000284770 PRSS46E5RG02 174 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 DFFBO76075 338 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms