RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 GMPPAQ96IJ6 420 aaPredicted RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 PGLYRP4Q96LB8 373 aa14.33□□□□□ -0.12
SRF-201ENST00000265354 PEF1Q9UBV8 284 aaKnown RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 H3BVH4 76 aa14.33□□□□□ -0.12
SRF-201ENST00000265354 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 ACSF3Q4G176 576 aaPredicted RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 SEPSECSQ9HD40 501 aaKnown RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 IL36BQ9NZH7 164 aa14.33□□□□□ -0.12
SRF-201ENST00000265354 F11RQ9Y624 299 aaKnown RBP14.33□□□□□ -0.12
SRF-201ENST00000265354 TRAV1-1A0A0B4J248 108 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 P01737 135 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 ADH4P08319 380 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 GCSHP23434 173 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 CDKN1AP38936 164 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 MOB3BQ86TA1 216 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 DNASE2BQ8WZ79 361 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 PKIBQ9C010 78 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 POLR3KQ9Y2Y1 108 aaPredicted RBP14.32□□□□□ -0.12
SRF-201ENST00000265354 A0A1W2PN81 502 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 PGPA6NDG6 321 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 DEFB109BQ30KR1 87 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 RNF115Q9Y4L5 304 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 HILPDAQ9Y5L2 63 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 H3BUT2 72 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 TNFSF13O75888 250 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 MYOD1P15172 320 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 RND2P52198 227 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 PMCHL1Q16048 86 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 ZNF585BQ52M93 769 aa14.32□□□□□ -0.12
SRF-201ENST00000265354 MKRN2OSH3BPM6 223 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 OR9G9P0C7N8 305 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 HIST1H1EP10412 219 aaKnown RBP14.31□□□□□ -0.12
SRF-201ENST00000265354 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 PAXXQ9BUH6 204 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 AMMECR1Q9Y4X0 333 aaPredicted RBP14.31□□□□□ -0.12
SRF-201ENST00000265354 PIEZO2Q9H5I5 2752 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 MUC21A0A0G2JKD1 596 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 MUC21A0A140T8X8 626 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 FOXH1O75593 365 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 MUC21Q5SSG8 566 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 ZNF114Q8NC26 417 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 SARAFQ96BY9 339 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 OR2V2Q96R30 315 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 MCRIP2Q9BUT9 160 aaKnown RBP14.31□□□□□ -0.12
SRF-201ENST00000265354 C10orf113Q5VZT2 155 aa14.31□□□□□ -0.12
SRF-201ENST00000265354 YTHDF2Q9Y5A9 579 aaKnown RBP14.31□□□□□ -0.12
SRF-201ENST00000265354 COL4A4P53420 1690 aaPredicted RBP14.31□□□□□ -0.12
SRF-201ENST00000265354 MPDU1O75352 247 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 IGKV1-39P01597 117 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 IGKV1D-39P04432 117 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 TNFAIP6P98066 277 aaPredicted RBP14.3□□□□□ -0.12
SRF-201ENST00000265354 PRB3Q04118 309 aaPredicted RBP14.3□□□□□ -0.12
SRF-201ENST00000265354 GGNQ86UU5 652 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 IGLV3-32A0A0A0MS00 114 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 NKX6-3A6NJ46 265 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 PEAR1Q5VY43 1037 aaPredicted RBP14.3□□□□□ -0.12
SRF-201ENST00000265354 MAP1LC3CQ9BXW4 147 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 GNB4Q9HAV0 340 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 TRAV3A0A0B4J244 114 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 M0R296 226 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 TDRG1Q3Y452 100 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 LEPROTL1O95214 131 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 IGLV3-19P01714 112 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 HLA-DQA1P01909 254 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 MAS1LP35410 378 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 HSPE1P61604 102 aaKnown RBP14.3□□□□□ -0.12
SRF-201ENST00000265354 OCIAD2Q56VL3 154 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 HAPLN4Q86UW8 402 aa14.3□□□□□ -0.12
SRF-201ENST00000265354 VCANP13611 3396 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 FAM87AP0C7U9 286 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 RPL8P62917 257 aaKnown RBP14.29□□□□□ -0.12
SRF-201ENST00000265354 TNXAQ16473 311 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 TMEM42Q69YG0 159 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 CST9LQ9H4G1 147 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 MED13Q9UHV7 2174 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 NOTCH2Q04721 2471 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 PLXNB1O43157 2135 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 C17orf82Q86X59 251 aaPredicted RBP14.29□□□□□ -0.12
SRF-201ENST00000265354 NPIPB3Q92617 1050 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 ZFHX2Q9C0A1 2572 aaPredicted RBP14.29□□□□□ -0.12
SRF-201ENST00000265354 TMEM238C9JI98 176 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 COX7A1P24310 79 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 CLEC5AQ9NY25 188 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 HSPB7Q9UBY9 170 aa14.29□□□□□ -0.12
SRF-201ENST00000265354 MT-ND6P03923 174 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 OR10W1Q8NGF6 305 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 TMEM186Q96B77 213 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 OR2J3O76001 311 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 FAM162BQ5T6X4 162 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 PRNTQ86SH4 94 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 ITLN1Q8WWA0 313 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 KCNS1Q96KK3 526 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 ELOVL5Q9NYP7 299 aa14.28□□□□□ -0.12
SRF-201ENST00000265354 hADV38S2A0JD32 116 aa14.27□□□□□ -0.12
SRF-201ENST00000265354 LINC00473A8K010 186 aa14.27□□□□□ -0.12
SRF-201ENST00000265354 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.12
SRF-201ENST00000265354 NUPR1O60356 82 aa14.27□□□□□ -0.12
SRF-201ENST00000265354 ACTL10Q5JWF8 245 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms