RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TUSC1Q2TAM9 212 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 CR1P17927 2039 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 LINC00862A6NCI5 91 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 FAM157CP0CG43 387 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 RUNX1Q01196 453 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 Q8N9W7 124 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 ZNF114Q8NC26 417 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 OR2G3Q8NGZ4 309 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
VAMP7-201ENST00000262640 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 RAB5CP51148 216 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 FXYD3Q14802 87 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 AANATQ16613 207 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 SLC7A5P1Q8MH63 180 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 P2RX4Q99571 388 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 PSMG3Q9BT73 122 aaPredicted RBP10.34□□□□□ -0.75
VAMP7-201ENST00000262640 MAP1AP78559 2803 aaPredicted RBP10.34□□□□□ -0.75
VAMP7-201ENST00000262640 FSHBP01225 129 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 FGF7P21781 194 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 NANPQ8TBE9 248 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 RNASEH2CQ8TDP1 164 aaKnown RBP10.34□□□□□ -0.75
VAMP7-201ENST00000262640 SSMEM1Q8WWF3 244 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 SAT2Q96F10 170 aaPredicted RBP10.34□□□□□ -0.75
VAMP7-201ENST00000262640 SSX3Q99909 188 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 RASL11BQ9BPW5 248 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
VAMP7-201ENST00000262640 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 UMAD1C9J7I0 102 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 AREGP15514 252 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 MDKP21741 143 aaPredicted RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 TMEM182Q6ZP80 229 aaPredicted RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 ABHD5Q8WTS1 349 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 RBM14Q96PK6 669 aaKnown RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 WDR83OSQ9Y284 106 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 ZNF705EA8MWA4 302 aaPredicted RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 MPDU1O75352 247 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 REG1AP05451 166 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 CX3CL1P78423 397 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 RSG1Q9BU20 258 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 MOB4Q9Y3A3 225 aa10.33□□□□□ -0.76
VAMP7-201ENST00000262640 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
VAMP7-201ENST00000262640 TRIM77I1YAP6 450 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 GPX4P36969 197 aaPredicted RBP10.32□□□□□ -0.76
VAMP7-201ENST00000262640 BLOC1S1P78537 153 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 ARSJQ5FYB0 599 aaPredicted RBP10.32□□□□□ -0.76
VAMP7-201ENST00000262640 BTNL8Q6UX41 500 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 CENPVQ7Z7K6 275 aaPredicted RBP10.32□□□□□ -0.76
VAMP7-201ENST00000262640 OR1P1Q8NH06 330 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 CACNG8Q8WXS5 425 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 CXorf58Q96LI9 332 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 SLC25A33Q9BSK2 321 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 MED9Q9NWA0 146 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 PDZD2O15018 2839 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 PRRC2AP48634 2157 aaKnown RBP10.32□□□□□ -0.76
VAMP7-201ENST00000262640 ATP6V1G1O75348 118 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 SERF2P84101 59 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 CD69Q07108 199 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 C9orf139Q6ZV77 190 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 ZNF709Q8N972 641 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 F11RQ9Y624 299 aaKnown RBP10.32□□□□□ -0.76
VAMP7-201ENST00000262640 RFNGQ9Y644 331 aa10.32□□□□□ -0.76
VAMP7-201ENST00000262640 C17orf112F2Z3M2 114 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 SMAD7O15105 426 aaKnown RBP10.31□□□□□ -0.76
VAMP7-201ENST00000262640 PRH1P02810 166 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 APELAP0DMC3 54 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 AKR1C8PQ5T2L2 129 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 PFDN2Q9UHV9 154 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 FBXO7Q9Y3I1 522 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 IGHV7-81A0A0B4J1V7 117 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 A6NDX4 124 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 H3BUX3 64 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 CORTO00230 105 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 TSPAN9O75954 239 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 AKR1C1Q04828 323 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 PARP11Q9NR21 331 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 PITPNC1Q9UKF7 332 aa10.31□□□□□ -0.76
VAMP7-201ENST00000262640 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
VAMP7-201ENST00000262640 CAMLGP49069 296 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 NDPQ00604 133 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 DPPA3Q6W0C5 159 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 SLC16A13Q7RTY0 426 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 TMEM219Q86XT9 240 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 OR1L6Q8NGR2 347 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 SLC35E1Q96K37 410 aa10.3□□□□□ -0.76
VAMP7-201ENST00000262640 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
VAMP7-201ENST00000262640 SOX15O60248 233 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms