RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 AGAP20933 346 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 C11orf71Q6IPW1 123 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 BEND2Q8NDZ0 799 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 NANPQ8TBE9 248 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 PARLQ9H300 379 aa10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 ZNF430Q9H8G1 570 aaPredicted RBP10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 AMMECR1Q9Y4X0 333 aaPredicted RBP10.46□□□□□ -0.74
SPTLC1-201ENST00000262554 SLC25A17O43808 307 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 LIPFP07098 398 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 SUB1P53999 127 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 PRR20EP86478 221 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 PRR20CP86479 221 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 PRR20DP86480 221 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 PRR20BP86481 221 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 PRR20AP86496 221 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 CD69Q07108 199 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 GAMTQ14353 236 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 ELOBQ15370 118 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 SPNS3Q6ZMD2 512 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 ABHD5Q8WTS1 349 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 CACNG8Q8WXS5 425 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 TXNDC17Q9BRA2 123 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 CTDSP1Q9GZU7 261 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 INSIG2Q9Y5U4 225 aa10.45□□□□□ -0.74
SPTLC1-201ENST00000262554 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 CLDN34H7C241 214 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 LY6HO94772 140 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 MT-CO2P00403 227 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 SOD3P08294 240 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 GPX4P36969 197 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 UBE2G2P60604 165 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 ADIRFQ15847 76 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 TEX45Q8NA69 505 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 ONECUT1Q9UBC0 465 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 E7EUB6 86 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 F6UZH7 168 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 LINC00869P0C866 280 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 COX7A1P24310 79 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 DLX1P56177 255 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 ZNF343Q6P1L6 599 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 SLC16A13Q7RTY0 426 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 MOB3BQ86TA1 216 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 MRPL41Q8IXM3 137 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 Q8WTZ3 238 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
SPTLC1-201ENST00000262554 CGB1A6NKQ9 187 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 S100A6P06703 90 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 RPS10P46783 165 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 WT1-ASQ06250 92 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 C10orf55Q5SWW7 151 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 C1QL4Q86Z23 238 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 MMD2Q8IY49 270 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 LY6G5BQ8NDX9 201 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 RNASEH2CQ8TDP1 164 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 RPEQ96AT9 228 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 RITA1Q96K30 269 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 SEPSECSQ9HD40 501 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 MALRD1Q5VYJ5 2156 aa10.43□□□□□ -0.74
SPTLC1-201ENST00000262554 VENTXO95231 258 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 GCHFRP30047 84 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 OR10J1P30954 320 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 RND2P52198 227 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 MLANAQ16655 118 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 PNKDQ8N490 385 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 C19orf24Q9BVV8 132 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 CHODLQ9H9P2 273 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 KLF2Q9Y5W3 355 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 ATRXP46100 2492 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 IGKV1OR2-108A0A075B7D4 117 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 C22orf46C9J442 243 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 CLN5O75503 358 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 ACTL6BO94805 426 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 ATP5G3P48201 142 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 C4orf17Q53FE4 359 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 FAM78BQ5VT40 261 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
SPTLC1-201ENST00000262554 SMG1Q96Q15 3661 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 TGIF2-C20orf24A0A0A6YYL0 155 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 CXCL1P09341 107 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 PRSS8Q16651 343 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 SPATA31B1PQ5VZV4 182 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 ACY3Q96HD9 319 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 SSBP3Q9BWW4 388 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 COL6A6A6NMZ7 2263 aa10.41□□□□□ -0.74
SPTLC1-201ENST00000262554 A0A1W2PPI3 338 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 CRYGBP07316 175 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 NPPCP23582 126 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 RPL27AP46776 148 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms