RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ANXA10Q9UJ72 324 aa4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-201ENST00000260810 SPDEFO95238 335 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 CD5P06127 495 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ORM2P19652 201 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 AKR1C3P42330 323 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 TNFAIP6P98066 277 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 DHRS7BQ6IAN0 325 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 LCNL1Q6ZST4 164 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM18Q96B42 140 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 TMUB1Q9BVT8 246 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 SMDT1Q9H4I9 107 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF705EA8MWA4 302 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 PMP2P02689 132 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 S100A11P31949 105 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 HAGHQ16775 308 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 MOB3AQ96BX8 217 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 CITED4Q96RK1 184 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 HSD17B10Q99714 261 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 SSX3Q99909 188 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 RASL11BQ9BPW5 248 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ALX4Q9H161 411 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 C16orf97H3BN30 126 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 RBP4P02753 201 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 MUC1P15941 1255 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 OR10Z1Q8NGY1 313 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 MYOZ3Q8TDC0 251 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 FANCD2OSQ96PS1 177 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 C19orf24Q9BVV8 132 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ELOA3CA0A087WX78 387 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 OR10J4P0C629 311 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 CD24P25063 80 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 FLI1Q01543 452 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 PATE2Q6UY27 113 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF546Q86UE3 836 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 ZFP82Q8N141 532 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 DRAM1Q8N682 238 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 OR1J1Q8NGS3 322 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 TMEM56-RWDD3S4R434 201 aa4.42□□□□□ -1.7
TOPBP1-201ENST00000260810 M0QZK8 103 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 CHEK1O14757 476 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4A8P0C604 315 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 CD81P60033 236 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 UBE2KP61086 200 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 HERVK_113P61574 105 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 ID3Q02535 119 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC7A5P1Q8MH63 180 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 KLHDC1Q8N7A1 406 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 ST8SIA2Q92186 375 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 PHYHIPLQ96FC7 376 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 PKIGQ9Y2B9 76 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 LSM4Q9Y4Z0 139 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 C9orf170A2RU37 121 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 HSPB6O14558 160 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 CRISP2P16562 243 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 NPBWR1P48145 328 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF674Q2M3X9 581 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 ACOT7LQ6ZUV0 252 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 DRAXINQ8NBI3 349 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 BVESQ8NE79 360 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2T35Q8NGX2 323 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 SH3BGRL2Q9UJC5 107 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 CDC42EP3Q9UKI2 254 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 A0A0B4J2A0 478 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 TCAPO15273 167 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 ZNF833PQ6ZTB9 187 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 SHPKQ9UHJ6 478 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 IGSF23A1L1A6 192 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 C15orf62A8K5M9 175 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 BET1O15155 118 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 TSPOP30536 169 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 LINC00310P59036 64 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 RHOBP62745 196 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 SORDQ00796 357 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 OR5AP2Q8NGF4 316 aa4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 EAF1Q96JC9 268 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-201ENST00000260810 A8MXK9 166 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 J3QT63 122 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 SEC11BP0C7V7 166 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 SLC25A48Q6ZT89 311 aaKnown RBP4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 LYG2Q86SG7 212 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 GIMAP1Q8WWP7 306 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 PKIBQ9C010 78 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 OR2S2Q9NQN1 319 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 CCL28Q9NRJ3 127 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 FABP7O15540 132 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 MPDU1O75352 247 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 IGHV2-5P01817 119 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 SSTR2P30874 369 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 SNU13P55769 128 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms