RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SLC16A13Q7RTY0 426 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 AURKAIP1Q9NWT8 199 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 ZNF257Q9Y2Q1 563 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 CRYBG3Q68DQ2 2970 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 TRAV20A0A0B4J274 112 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 IGHV1-69-2A0A0G2JMI3 117 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 MLANAQ16655 118 aa15.18■□□□□ 0.02
PDLIM4-201ENST00000253754 E7EUB6 86 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 GATCO43716 136 aaKnown RBP15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 APOA2P02652 100 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 FABP1P07148 127 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 STAG3L2P0CL84 134 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 STAG3L3P0CL85 134 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 EFNB3Q15768 340 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 OR5AN1Q8NGI8 311 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 BET1LQ9NYM9 111 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 FOXH1O75593 365 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 NDUFA6P56556 154 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 CLEC12BQ2HXU8 276 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 ITLN2Q8WWU7 325 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 ELOVL1Q9BW60 279 aa15.17■□□□□ 0.02
PDLIM4-201ENST00000253754 HRNRQ86YZ3 2850 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 IGKV1OR2-108A0A075B7D4 117 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BKO60814 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 CLN5O75503 358 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BJP06899 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 SMIM6P0DI80 62 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BOP23527 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BBP33778 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 DLX6P56179 175 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BDP58876 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BCP62807 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST2H2BEQ16778 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 OSR1Q8TAX0 266 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BHQ93079 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BNQ99877 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 HIST1H2BMQ99879 126 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 CTDSP1Q9GZU7 261 aa15.16■□□□□ 0.02
PDLIM4-201ENST00000253754 NDUFB4O95168 129 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 GATA2P23769 480 aaPredicted RBP15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 C10orf55Q5SWW7 151 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 FLYWCH2Q96CP2 140 aaKnown RBP15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 NABP2Q9BQ15 211 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 DOK5Q9P104 306 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 LRRK2Q5S007 2527 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 PGPEP1LA6NFU8 196 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 ACTL6BO94805 426 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 TMEM249Q2WGJ8 235 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 GSN-AS1Q9NRJ2 163 aa15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 YTHDF2Q9Y5A9 579 aaKnown RBP15.15■□□□□ 0.02
PDLIM4-201ENST00000253754 CXorf1O96002 111 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 RNASE2P10153 161 aaKnown RBP15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 PRR20EP86478 221 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 PRR20CP86479 221 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 PRR20DP86480 221 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 PRR20BP86481 221 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 PRR20AP86496 221 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 TMEM155Q4W5P6 130 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 RITA1Q96K30 269 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 IFITM10A6NMD0 228 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 B9A039 149 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 LINC00869P0C866 280 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 RPL29P47914 159 aaKnown RBP15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 ZNF672Q499Z4 452 aaPredicted RBP15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 TMEM177Q53S58 311 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 MUC15Q8N387 334 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 ZNF843Q8N446 348 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 C11orf42Q8N5U0 333 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 ZNF114Q8NC26 417 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 OR5B3Q8NH48 314 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 NANPQ8TBE9 248 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 FRZBQ92765 325 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 ST6GALNAC6Q969X2 333 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 KCNIP2Q9NS61 270 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 KAAG1Q9UBP8 84 aa15.14■□□□□ 0.01
PDLIM4-201ENST00000253754 H7BYZ3 331 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 PDE6DO43924 150 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 PFN1P07737 140 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 RPL8P62917 257 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 GAMTQ14353 236 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 COMMD5Q9GZQ3 224 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 TPSG1Q9NRR2 321 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 NDUFA4L2Q9NRX3 87 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 TRBV24-1A0A075B6N3 115 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 IGHV3-72A0A0B4J1Y9 119 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 SCO2A0A1W2PP80 73 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 IGHV1-8P0DP01 117 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 GCHFRP30047 84 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 GALR1P47211 349 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 RAB31Q13636 194 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 MIR17HGQ75NE6 70 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 OR4P4Q8NGL7 312 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 FKBP11Q9NYL4 201 aa15.13■□□□□ 0.01
PDLIM4-201ENST00000253754 TACC2O95359 2948 aa15.12■□□□□ 0.01
PDLIM4-201ENST00000253754 S100A8P05109 93 aa15.12■□□□□ 0.01
PDLIM4-201ENST00000253754 TRGC1P0CF51 173 aa15.12■□□□□ 0.01
PDLIM4-201ENST00000253754 BTF3P20290 206 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-201ENST00000253754 SSTP61278 116 aa15.12■□□□□ 0.01
PDLIM4-201ENST00000253754 C2orf83Q53S99 150 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms