RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NHP2Q9NX24 153 aaKnown RBP11.62□□□□□ -0.55
HCFC2-201ENST00000229330 COX11Q9Y6N1 276 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 ZNF703Q9H7S9 590 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-201ENST00000229330 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
HCFC2-201ENST00000229330 HGFACQ04756 655 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 HSD52Q0P140 79 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 TIMP4Q99727 224 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 DEPPQ9NTK1 212 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 TP53BP1Q12888 1972 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-201ENST00000229330 TRBV20OR9-2A0A075B6H5 130 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 ATP5LO75964 103 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 PSG1P11464 419 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 MEF2CQ06413 473 aaPredicted RBP11.61□□□□□ -0.55
HCFC2-201ENST00000229330 GPR82Q96P67 336 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 FOXC2Q99958 501 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 DOCK4Q8N1I0 1966 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 MOSP00540 346 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 ADIPOQQ15848 244 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
HCFC2-201ENST00000229330 TRPM7Q96QT4 1865 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 IGKV3D-11A0A0A0MRZ8 115 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 QRFPP83859 136 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 GAGE1Q13065 139 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 C1QTNF5Q9BXJ0 243 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 IGHV3-72A0A0B4J1Y9 119 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 REG1AP05451 166 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 PPIHO43447 177 aaKnown RBP11.6□□□□□ -0.55
HCFC2-201ENST00000229330 NMSQ5H8A3 153 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 PRSS2P07478 247 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 CTSSP25774 331 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
HCFC2-201ENST00000229330 STAG3L3P0CL85 134 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 GATA2P23769 480 aaPredicted RBP11.59□□□□□ -0.55
HCFC2-201ENST00000229330 CX3CL1P78423 397 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 KHDC1LQ5JSQ8 128 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 Q6AWC8 147 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 ORMDL3Q8N138 153 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 KLF14Q8TD94 323 aaPredicted RBP11.59□□□□□ -0.55
HCFC2-201ENST00000229330 CRIM1Q9NZV1 1036 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 ZDBF2Q9HCK1 2354 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 GPX1P07203 203 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 SCGB1A1P11684 91 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 FAM186AA6NE01 2351 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
HCFC2-201ENST00000229330 MRPS16Q9Y3D3 137 aaKnown RBP11.59□□□□□ -0.55
HCFC2-201ENST00000229330 PPIAL4EA0A075B759 164 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 A0A1B0GWJ7 208 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 PPIAL4FP0DN26 164 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 ESDP10768 282 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 TMEM144Q7Z5S9 345 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 OR4C13Q8NGP0 309 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 PPIAL4AQ9Y536 164 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 EFNB3Q15768 340 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 ITLN1Q8WWA0 313 aa11.59□□□□□ -0.55
HCFC2-201ENST00000229330 TSPAN13O95857 204 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 LINC00271P0C7V0 271 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 OR52E5Q8NH55 327 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 BEX4Q9NWD9 120 aaPredicted RBP11.58□□□□□ -0.56
HCFC2-201ENST00000229330 KIF26BQ2KJY2 2108 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 WNT9BO14905 357 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 CFPP27918 469 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 TEX29Q8N6K0 151 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 A0A0G2JLM5 398 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 C9JCJ5 164 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 C10orf126Q8N4M7 172 aa11.58□□□□□ -0.56
HCFC2-201ENST00000229330 IFNL4K9M1U5 179 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 RAMP3O60896 148 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 PFN1P07737 140 aaKnown RBP11.57□□□□□ -0.56
HCFC2-201ENST00000229330 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 ZNF837Q96EG3 531 aaPredicted RBP11.57□□□□□ -0.56
HCFC2-201ENST00000229330 J3QW42 95 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 ITGB1BP1O14713 200 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 SLC25A53Q5H9E4 307 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 FAM90A27PA6NNH2 459 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 EFEMP2O95967 443 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 GFRA1P56159 465 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 DLX6P56179 175 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 RAXQ9Y2V3 346 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 GREB1Q4ZG55 1949 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 SRSF7Q16629 238 aaKnown RBP eCLIP11.57□□□□□ -0.56
HCFC2-201ENST00000229330 OCIAD2Q56VL3 154 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 PEAR1Q5VY43 1037 aaPredicted RBP11.57□□□□□ -0.56
HCFC2-201ENST00000229330 OR9G4Q8NGQ1 327 aa11.57□□□□□ -0.56
HCFC2-201ENST00000229330 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms