RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PSG7Q13046 419 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 APCDD1LQ8NCL9 501 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 PIN1P1O15428 100 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 SLC25A20O43772 301 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 FOXA3P55318 350 aaPredicted RBP11.14□□□□□ -0.63
COL1A1-201ENST00000225964 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 OR9G4Q8NGQ1 327 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 BRWD3Q6RI45 1802 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 PATJQ8NI35 1801 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 K7ERU9 68 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-201ENST00000225964 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 RNASEH2CQ8TDP1 164 aaKnown RBP11.13□□□□□ -0.63
COL1A1-201ENST00000225964 COL4A5P29400 1685 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 ZNF660Q6AZW8 331 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-201ENST00000225964 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
COL1A1-201ENST00000225964 TMEM14DPA8MWL7 114 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 LDLRAD4O15165 306 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
COL1A1-201ENST00000225964 C10orf126Q8N4M7 172 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 AICDAQ9GZX7 198 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 SAP30O75446 220 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 TBR1Q16650 682 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 CBLN1P23435 193 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
COL1A1-201ENST00000225964 GCM2O75603 506 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-201ENST00000225964 TFF1P04155 84 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 FHITP49789 147 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 DTX2Q86UW9 622 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 DANCRP0C864 163 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 SAMD13Q5VXD3 122 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 RPP21Q9H633 154 aaKnown RBP11.12□□□□□ -0.63
COL1A1-201ENST00000225964 SAA2-SAA4A0A096LPE2 208 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 SAA2P0DJI9 122 aaPredicted RBP11.12□□□□□ -0.63
COL1A1-201ENST00000225964 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
COL1A1-201ENST00000225964 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
COL1A1-201ENST00000225964 PSME4Q14997 1843 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-201ENST00000225964 GPX4P36969 197 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-201ENST00000225964 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 C1QTNF5Q9BXJ0 243 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-201ENST00000225964 A0A0G2JK05 382 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 SLC17A3O00476 420 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 UMODP07911 640 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 UNC13CQ8NB66 2214 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 ATP5LO75964 103 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 CD33P20138 364 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 LHX2P50458 406 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
COL1A1-201ENST00000225964 LINC01590Q5TEZ4 76 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 ST20Q9HBF5 79 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 SPRR3Q9UBC9 169 aa11.11□□□□□ -0.63
COL1A1-201ENST00000225964 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
COL1A1-201ENST00000225964 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 RHOGP84095 191 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 FAM90A1Q86YD7 464 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
COL1A1-201ENST00000225964 WNT2P09544 360 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 CA7P43166 264 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 GNG5P63218 68 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 TAF1LQ8IZX4 1826 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 SNAI2O43623 268 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 CYB5R2Q6BCY4 276 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 FBLN7Q53RD9 439 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 SLC25A28Q96A46 364 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 GGACTQ9BVM4 153 aa11.1□□□□□ -0.63
COL1A1-201ENST00000225964 GNLYP22749 145 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TMEM133Q9H2Q1 129 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TMEM50AO95807 157 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 ASCL4Q6XD76 172 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 PUSL1Q8N0Z8 303 aaKnown RBP11.09□□□□□ -0.63
COL1A1-201ENST00000225964 ZNF837Q96EG3 531 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-201ENST00000225964 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-201ENST00000225964 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 PSCAO43653 123 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TM2D1Q9BX74 207 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
COL1A1-201ENST00000225964 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 APOMO95445 188 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 H2BFSP57053 126 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 DSCR9P59020 149 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 TCF23Q7RTU1 214 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms