RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PLXNB2O15031 1838 aa8.82□□□□□ -1
VCL-201ENST00000211998 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.82□□□□□ -1
VCL-201ENST00000211998 C4orf51C9J302 202 aa8.82□□□□□ -1
VCL-201ENST00000211998 PROB1E7EW31 1015 aa8.82□□□□□ -1
VCL-201ENST00000211998 NBEAP1P0C6P0 100 aa8.82□□□□□ -1
VCL-201ENST00000211998 COX6B1P14854 86 aa8.82□□□□□ -1
VCL-201ENST00000211998 SSBP2P81877 361 aaPredicted RBP8.82□□□□□ -1
VCL-201ENST00000211998 ZNF146Q15072 292 aa8.82□□□□□ -1
VCL-201ENST00000211998 ECSCRQ19T08 205 aa8.82□□□□□ -1
VCL-201ENST00000211998 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
VCL-201ENST00000211998 OR5AN1Q8NGI8 311 aa8.82□□□□□ -1
VCL-201ENST00000211998 DPM2O94777 84 aa8.82□□□□□ -1
VCL-201ENST00000211998 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
VCL-201ENST00000211998 SAP25Q8TEE9 199 aa8.82□□□□□ -1
VCL-201ENST00000211998 TNFRSF14Q92956 283 aa8.82□□□□□ -1
VCL-201ENST00000211998 ATP6V0BQ99437 205 aa8.82□□□□□ -1
VCL-201ENST00000211998 PILRBQ9UKJ0 227 aa8.82□□□□□ -1
VCL-201ENST00000211998 COL5A3P25940 1745 aaPredicted RBP8.81□□□□□ -1
VCL-201ENST00000211998 C9JQL5 133 aa8.81□□□□□ -1
VCL-201ENST00000211998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
VCL-201ENST00000211998 MPV17P39210 176 aa8.81□□□□□ -1
VCL-201ENST00000211998 NEUROG3Q9Y4Z2 214 aa8.81□□□□□ -1
VCL-201ENST00000211998 SCN3AQ9NY46 2000 aa8.81□□□□□ -1
VCL-201ENST00000211998 PPP1R17O96001 155 aa8.81□□□□□ -1
VCL-201ENST00000211998 DNM1P46Q6ZS02 220 aa8.81□□□□□ -1
VCL-201ENST00000211998 COQ2Q96H96 371 aa8.81□□□□□ -1
VCL-201ENST00000211998 FMC1Q96HJ9 113 aa8.81□□□□□ -1
VCL-201ENST00000211998 MCM3APO60318 1980 aa8.81□□□□□ -1
VCL-201ENST00000211998 TMEM229AB2RXF0 380 aa8.81□□□□□ -1
VCL-201ENST00000211998 J3QRE1 110 aa8.81□□□□□ -1
VCL-201ENST00000211998 ASCL4Q6XD76 172 aa8.81□□□□□ -1
VCL-201ENST00000211998 VKORC1Q9BQB6 163 aa8.81□□□□□ -1
VCL-201ENST00000211998 RABAC1Q9UI14 185 aa8.81□□□□□ -1
VCL-201ENST00000211998 ADAMTSL1Q8N6G6 1762 aa8.81□□□□□ -1
VCL-201ENST00000211998 KIAA1217Q5T5P2 1943 aa8.81□□□□□ -1
VCL-201ENST00000211998 MOSP00540 346 aa8.81□□□□□ -1
VCL-201ENST00000211998 REG1AP05451 166 aa8.81□□□□□ -1
VCL-201ENST00000211998 FAM106CPP0CH98 169 aa8.81□□□□□ -1
VCL-201ENST00000211998 DMRTC2Q8IXT2 367 aaPredicted RBP8.81□□□□□ -1
VCL-201ENST00000211998 OR10J6PQ8NGY7 276 aa8.81□□□□□ -1
VCL-201ENST00000211998 TRAV12-3A0A0B4J271 114 aa8.81□□□□□ -1
VCL-201ENST00000211998 GPX1P07203 203 aa8.81□□□□□ -1
VCL-201ENST00000211998 GAS1P54826 345 aa8.81□□□□□ -1
VCL-201ENST00000211998 EGR4Q05215 589 aa8.81□□□□□ -1
VCL-201ENST00000211998 PSG3Q16557 428 aa8.81□□□□□ -1
VCL-201ENST00000211998 TMEM30BQ3MIR4 351 aa8.81□□□□□ -1
VCL-201ENST00000211998 FHL5Q5TD97 284 aa8.81□□□□□ -1
VCL-201ENST00000211998 C16orf92Q96LL3 132 aa8.81□□□□□ -1
VCL-201ENST00000211998 RFNGQ9Y644 331 aa8.81□□□□□ -1
VCL-201ENST00000211998 ANKRD31Q8N7Z5 1873 aa8.8□□□□□ -1
VCL-201ENST00000211998 IGHV3-72A0A0B4J1Y9 119 aa8.8□□□□□ -1
VCL-201ENST00000211998 TRAV1-1A0A0B4J248 108 aa8.8□□□□□ -1
VCL-201ENST00000211998 TRAV24A0A0B4J272 114 aa8.8□□□□□ -1
VCL-201ENST00000211998 CD55P08174 381 aa8.8□□□□□ -1
VCL-201ENST00000211998 CDKN1AP38936 164 aa8.8□□□□□ -1
VCL-201ENST00000211998 ZNF826PQ6ZT77 177 aa8.8□□□□□ -1
VCL-201ENST00000211998 SYT8Q8NBV8 401 aa8.8□□□□□ -1
VCL-201ENST00000211998 MIA3Q5JRA6 1907 aa8.8□□□□□ -1
VCL-201ENST00000211998 IGKCP01834 107 aa8.8□□□□□ -1
VCL-201ENST00000211998 CCL8P80075 99 aa8.8□□□□□ -1
VCL-201ENST00000211998 MST1LQ2TV78 715 aa8.8□□□□□ -1
VCL-201ENST00000211998 WDR82Q6UXN9 313 aa8.8□□□□□ -1
VCL-201ENST00000211998 LINC01551Q86U37 167 aa8.8□□□□□ -1
VCL-201ENST00000211998 SLC25A45Q8N413 288 aa8.8□□□□□ -1
VCL-201ENST00000211998 TSSC4Q9Y5U2 329 aaPredicted RBP8.8□□□□□ -1
VCL-201ENST00000211998 SPTBP11277 2137 aa8.8□□□□□ -1
VCL-201ENST00000211998 FAM231BA6NCW3 169 aa8.8□□□□□ -1
VCL-201ENST00000211998 IGHMP01871 453 aa8.8□□□□□ -1
VCL-201ENST00000211998 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
VCL-201ENST00000211998 DEPPQ9NTK1 212 aa8.8□□□□□ -1
VCL-201ENST00000211998 C10orf128Q5T292 105 aa8.8□□□□□ -1
VCL-201ENST00000211998 FAM71F2Q6NXP2 309 aa8.8□□□□□ -1
VCL-201ENST00000211998 CCL13Q99616 98 aa8.8□□□□□ -1
VCL-201ENST00000211998 CDKN1BP46527 198 aa8.79□□□□□ -1
VCL-201ENST00000211998 ID3Q02535 119 aa8.79□□□□□ -1
VCL-201ENST00000211998 Q6AWC8 147 aa8.79□□□□□ -1
VCL-201ENST00000211998 TIMP4Q99727 224 aa8.79□□□□□ -1
VCL-201ENST00000211998 A0A1W2PS18 150 aa8.79□□□□□ -1
VCL-201ENST00000211998 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
VCL-201ENST00000211998 LEAP2Q969E1 77 aa8.79□□□□□ -1
VCL-201ENST00000211998 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
VCL-201ENST00000211998 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
VCL-201ENST00000211998 SP9P0CG40 484 aa8.79□□□□□ -1
VCL-201ENST00000211998 GATA2P23769 480 aaPredicted RBP8.79□□□□□ -1
VCL-201ENST00000211998 OR52E5Q8NH55 327 aa8.79□□□□□ -1
VCL-201ENST00000211998 C17orf98A8MV24 154 aa8.79□□□□□ -1
VCL-201ENST00000211998 RSPO4Q2I0M5 234 aaPredicted RBP8.79□□□□□ -1
VCL-201ENST00000211998 FOXI3A8MTJ6 420 aaPredicted RBP8.78□□□□□ -1
VCL-201ENST00000211998 NKX2-8O15522 239 aa8.78□□□□□ -1
VCL-201ENST00000211998 CELA2AP08217 269 aa8.78□□□□□ -1
VCL-201ENST00000211998 GNG5P63218 68 aa8.78□□□□□ -1
VCL-201ENST00000211998 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
VCL-201ENST00000211998 PEAR1Q5VY43 1037 aaPredicted RBP8.78□□□□□ -1
VCL-201ENST00000211998 C1orf122Q6ZSJ8 110 aa8.78□□□□□ -1
VCL-201ENST00000211998 ITLN1Q8WWA0 313 aa8.78□□□□□ -1
VCL-201ENST00000211998 ZNF703Q9H7S9 590 aaPredicted RBP8.78□□□□□ -1
VCL-201ENST00000211998 IGKV3D-15A0A087WSY6 115 aa8.78□□□□□ -1
VCL-201ENST00000211998 J3QW42 95 aa8.78□□□□□ -1
VCL-201ENST00000211998 IGKV3-15P01624 115 aa8.78□□□□□ -1
VCL-201ENST00000211998 MESP2Q0VG99 397 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms