RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MUC21A0A0G2JKD1 596 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 LY6G6EA0A0G2JKS1 128 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MUC21A0A140T8X8 626 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 ANKRD30BLA7E2S9 258 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 OR7C2O60412 319 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF138P52744 262 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MLANAQ16655 118 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 OR8B2Q96RD0 313 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 U3KQA8 63 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 HCFC1P51610 2035 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 TMPRSS2O15393 492 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 UQCRFS1P47985 274 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 TRAT1Q6PIZ9 186 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 DEFB127Q9H1M4 99 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF355PQ9NSJ1 428 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 CDC42EP3Q9UKI2 254 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 TIMM9Q9Y5J7 89 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 V9GYV3 84 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 TACC2O95359 2948 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 TANC2Q9HCD6 1990 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 USF1P22415 310 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-227ENST00000640957 PRRX1P54821 245 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 PMS2CLQ68D20 193 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 CST9LQ9H4G1 147 aa11.42□□□□□ -0.58
SCARB2-227ENST00000640957 HELTA6NFD8 242 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 C12orf77C9JDV5 145 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 GCHFRP30047 84 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 IL11RAQ14626 422 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PRAMEF5Q5TYX0 476 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 MFAP2P55001 183 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PLP2Q04941 152 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 NINJ1Q92982 152 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 IMMP1LQ96LU5 166 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PILRBQ9UKJ0 227 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 LOXL2Q9Y4K0 774 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 TECTAO75443 2155 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 A0A087X0K7 114 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 ITGB1BP1O14713 200 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 CD99P14209 185 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 PCBD1P61457 104 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
SCARB2-227ENST00000640957 IGLV3-32A0A0A0MS00 114 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 MT-CO3P00414 261 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 APCSP02743 223 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 MAGEA5P43359 124 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 UTF1Q5T230 341 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 Q8NFD4 153 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF137PP52743 207 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 DHRS13Q6UX07 377 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 WDR86Q86TI4 376 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 GGNQ86UU5 652 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 PLCE1Q9P212 2302 aa11.4□□□□□ -0.58
SCARB2-227ENST00000640957 CORTO00230 105 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 HBZP02008 142 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 IGFBP2P18065 325 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 GABRA6Q16445 453 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 WDR83OSQ9Y284 106 aa11.4□□□□□ -0.59
SCARB2-227ENST00000640957 CSN3P07498 182 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 EFNB3Q15768 340 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 RPL39P5Q59GN2 51 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 GALMQ96C23 342 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 IGHV2-70DA0A0C4DH43 119 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-227ENST00000640957 PLAUP00749 431 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 GNG3P63215 75 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
SCARB2-227ENST00000640957 Q6P435 159 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 CLEC2AQ6UVW9 174 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 Q6ZS49 121 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 GCNT2Q8N0V5 402 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 CT55Q8WUE5 264 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 SARAFQ96BY9 339 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 PLEKHA3Q9HB20 300 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
SCARB2-227ENST00000640957 CXorf1O96002 111 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 SRD5A2P31213 254 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 Q0VG73 95 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 Q6ZR03 302 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 SFXN3Q9BWM7 321 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 TRAV5A0A0B4J249 113 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms