RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 ZNF788Q6ZQV5 615 aa13.36□□□□□ -0.27
KCNMA1-260ENST00000639483 DAZAP1Q96EP5 407 aaKnown RBP13.36□□□□□ -0.27
KCNMA1-260ENST00000639483 IFI27L2Q9H2X8 130 aa13.36□□□□□ -0.27
KCNMA1-260ENST00000639483 MANBALQ9NQG1 85 aa13.36□□□□□ -0.27
KCNMA1-260ENST00000639483 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 TCL1AP56279 114 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 DPPA3Q6W0C5 159 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 ZNF383Q8NA42 475 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 LINC00869P0C866 280 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 SPNS3Q6ZMD2 512 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 STPG3Q8N7X2 389 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 CLDND2Q8NHS1 167 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 LOC102723971A0A1B0GUV8 181 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 OR51G1Q8NGK1 321 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 FBXL15Q9H469 300 aa13.35□□□□□ -0.27
KCNMA1-260ENST00000639483 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 TGIF2-C20orf24A0A0A6YYL0 155 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 NDUFA2O43678 99 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 CD5P06127 495 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 SGK494Q96LW2 274 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 PTPN13Q12923 2485 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 ICAM4Q14773 271 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 HIST1H2BAQ96A08 127 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 AMMECR1Q9Y4X0 333 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 CEACAM3P40198 252 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 SLC16A13Q7RTY0 426 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 PARLQ9H300 379 aa13.34□□□□□ -0.27
KCNMA1-260ENST00000639483 C1QTNF9BB2RNN3 333 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 MOSP00540 346 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 C1QTNF9P0C862 333 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 COL8A2P25067 703 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF596Q8TC21 504 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 TMEM186Q96B77 213 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 CLEC7AQ9BXN2 247 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 SEBOXQ9HB31 216 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 PNRC1Q12796 327 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF506Q5JVG8 444 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 C16orf82Q7Z2V1 217 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 CXorf1O96002 111 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 CCKARP32238 428 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 Q56UQ5 140 aa13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 DHRS7BQ6IAN0 325 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-260ENST00000639483 IGLV3-9A0A075B6K5 115 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 MC5RP33032 325 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 ATP5G3P48201 142 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 RANP62826 216 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 COA4Q9NYJ1 87 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 PLA2G2EQ9NZK7 142 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 IGHV3-35A0A0C4DH35 117 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 SCGB2A1O75556 95 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 IL6RP08887 468 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 USF1P22415 310 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 TMUB1Q9BVT8 246 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 SAMD10Q9BYL1 202 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 C15orf65H3BRN8 121 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 GNG4P50150 75 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 SLC35B1P78383 322 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 LCN2P80188 198 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 MLANAQ16655 118 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 IGF2-ASQ6U949 168 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 LHFPL4Q7Z7J7 247 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 NABP2Q9BQ15 211 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 DOPEY2Q9Y3R5 2298 aa13.32□□□□□ -0.28
KCNMA1-260ENST00000639483 MPDU1O75352 247 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 TRGC2P03986 189 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 PRB4P10163 310 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 HTR1DP28221 377 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 S100A12P80511 92 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 OR2T6Q8NHC8 308 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 SMDT1Q9H4I9 107 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF705FA8MVS1 300 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 LIPFP07098 398 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF705DP0CH99 300 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 ZNF705BP0CI00 300 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 Q8NA96 180 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
KCNMA1-260ENST00000639483 LOC105371242A0A075B767 164 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 LOC105371267A0A1B0GV96 52 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 BAGE3Q86Y29 109 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 BAGE2Q86Y30 109 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 C17orf58Q2M2W7 97 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 HEPN1Q6WQI6 88 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
KCNMA1-260ENST00000639483 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms