RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MP68P56378 58 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TAS2R46P59540 309 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FKBP1AP62942 108 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 DCDP81605 110 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 CYCSP99999 105 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 HOXC5Q00444 222 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 EIF3IQ13347 325 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 PDGFRLQ15198 375 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 C17orf58Q2M2W7 97 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 C6orf99Q4VX62 202 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 ABCA11PQ4W5N1 156 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SPANXN3Q5MJ09 141 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FAM74A1Q5RGS3 127 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 C1orf100Q5SVJ3 147 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 LYRM7Q5U5X0 104 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FAM19A3Q7Z5A8 133 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 OR10D4PQ8NGN7 298 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 OR9G1Q8NH87 305 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 RPS4Y2Q8TD47 263 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MAGOHBQ96A72 148 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 LINC00052Q96N35 136 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 OR2A5Q96R48 311 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 GPX7Q96SL4 187 aaPredicted RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 LINC01587Q99440 93 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TM2D3Q9BRN9 247 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 PAXXQ9BUH6 204 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 GGTLC1Q9BX51 225 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MRPL32Q9BYC8 188 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IMUPQ9GZP8 106 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 RERGLQ9H628 205 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SCRT2Q9NQ03 307 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FAM49BQ9NUQ9 324 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TAS2R8Q9NYW2 309 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TVP23BQ9NYZ1 205 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TAAR3PQ9P1P4 343 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 TRMT112Q9UI30 125 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 LINC00527Q9UJ94 153 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 POMPQ9Y244 141 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 COQ4Q9Y3A0 265 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 HEBP2Q9Y5Z4 205 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FER1L5A0AVI2 2057 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MYH1P12882 1939 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MYH8P13535 1937 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 PRDM15P57071 1507 aaPredicted RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 ARAP3Q8WWN8 1544 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 COL2A1P02458 1487 aaPredicted RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 KDM6AO15550 1401 aaPredicted RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ATRNO75882 1429 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 IGKV1-27A0A075B6S5 117 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 SMIM26A0A096LP01 95 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV1-69DA0A0B4J2H0 117 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TRBV7-6A0A0J9YX20 115 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 C7orf71A4D174 169 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ARRDC5A6NEK1 342 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 EPOPA6NHQ4 379 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 FNDC10F2Z333 226 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 K7N7A8 449 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TNFP01375 233 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ZSCAN5DPP0CG00 497 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 IL7P13232 177 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 CRYGSP22914 178 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV1-2P23083 117 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 PSMB8P28062 276 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 IMPA1P29218 277 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 AQP1P29972 269 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 RBMXP38159 391 aaKnown RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 PSMB3P49720 205 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 P2RX1P51575 399 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ZNF138P52744 262 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TMBIM6P55061 237 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 RBM11P57052 281 aaKnown RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TPPP2P59282 170 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 HERVK_113P63121 156 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 RTL8BQ17RB0 113 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 Q5BKY6 102 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 MEIG1Q5JSS6 88 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TMEM244Q5VVB8 128 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ZNF773Q6PK81 442 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 WDR86Q86TI4 376 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 LRP11Q86VZ4 500 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 RNF175Q8N4F7 328 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TTC9CQ8N5M4 171 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 YIPF7Q8N8F6 280 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 ZDHHC22Q8N966 263 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TMEM75Q8N9X5 138 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 OR2M3Q8NG83 312 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 RTN4IP1Q8WWV3 396 aaPredicted RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 TAF15Q92804 592 aaKnown RBP eCLIP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 GNPNAT1Q96EK6 184 aaPredicted RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 BORCS8Q96FH0 119 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 NAA38Q9BRA0 125 aaKnown RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 THTPAQ9BU02 230 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 DERL1Q9BUN8 251 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 MRPL20Q9BYC9 149 aaKnown RBP2.19□□□□□ -2.06
PSPC1-208ENST00000635562 REG4Q9BYZ8 158 aa2.19□□□□□ -2.06
PSPC1-208ENST00000635562 AICDAQ9GZX7 198 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms