RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 TMEFF2Q9UIK5 374 aaPredicted RBP4.78□□□□□ -1.64
EBF1-211ENST00000622875 USF3Q68DE3 2245 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 VWFP04275 2813 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 MDC1Q14676 2089 aaKnown RBP4.78□□□□□ -1.64
EBF1-211ENST00000622875 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 TMEM89A2RUT3 159 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 ZAR1LA6NP61 321 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 SHISA8B8ZZ34 492 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 NEURL1O76050 574 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 CSN1S1P47710 185 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 SGSHP51688 502 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 MRGPREQ86SM8 312 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 OR1L1Q8NH94 360 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 SAP30LQ9HAJ7 183 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 HINT3Q9NQE9 182 aaKnown RBP4.78□□□□□ -1.64
EBF1-211ENST00000622875 IL36GQ9NZH8 169 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 MLNRO43193 412 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 DANCRP0C864 163 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 STC1P52823 247 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 PSG4Q00888 419 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 CATR1Q13166 79 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
EBF1-211ENST00000622875 GGTA1PQ4G0N0 100 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 TREML4Q6UXN2 200 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 ZNF740Q8NDX6 193 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 IL17FQ96PD4 163 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 MLST8Q9BVC4 326 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 IER3IP1Q9Y5U9 82 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 DOCK10Q96BY6 2186 aa4.78□□□□□ -1.64
EBF1-211ENST00000622875 WNK1Q9H4A3 2382 aa4.78□□□□□ -1.65
EBF1-211ENST00000622875 A8MWV9 139 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 J3KTA2 159 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 HYPMO75409 117 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 PSMB5P28074 263 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 UTF1Q5T230 341 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 ABHD17BQ5VST6 288 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 LRRC29Q8WV35 223 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 PRTFDC1Q9NRG1 225 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 CISD1Q9NZ45 108 aaKnown RBP4.77□□□□□ -1.65
EBF1-211ENST00000622875 CRIM1Q9NZV1 1036 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 ODAMA1E959 279 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 IGLV3-27P01718 113 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 IL4P05112 153 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SSR2P43308 183 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 MAGEA5P43359 124 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 P2RX1P51575 399 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 CAV3P56539 151 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 PPP1CAP62136 330 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 Q56UQ5 140 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SFTPA2Q8IWL1 248 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 OR10G7Q8NGN6 311 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 ZNF519Q8TB69 540 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 TNFRSF13CQ96RJ3 184 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SOSTQ9BQB4 213 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 CA10Q9NS85 328 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 TMEM14AQ9Y6G1 99 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 GGTLC3B5MD39 225 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 FCGR3AP08637 254 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 MALP21145 153 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 CFHR2P36980 270 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 LPAR6P43657 344 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 HMGN2P46Q86SG4 172 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SHISA5Q8N114 240 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 UBE2E3Q969T4 207 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 PERPQ96FX8 193 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 HRASLS2Q9NWW9 162 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SIGLEC8Q9NYZ4 499 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 INTS1Q8N201 2190 aaKnown RBP4.77□□□□□ -1.65
EBF1-211ENST00000622875 SACSQ9NZJ4 4579 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 TRAV8-4A0A0B4J246 113 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 TMEM233B4DJY2 109 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 FGF10O15520 208 aaPredicted RBP4.77□□□□□ -1.65
EBF1-211ENST00000622875 METRNLQ641Q3 311 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 DEFB106AQ8N104 65 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 TSACCQ96A04 125 aaPredicted RBP4.77□□□□□ -1.65
EBF1-211ENST00000622875 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 SH3BGRL3Q9H299 93 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 CDH20Q9HBT6 801 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 METRNQ9UJH8 293 aa4.77□□□□□ -1.65
EBF1-211ENST00000622875 LRRC30A6NM36 301 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 RAMP1O60894 148 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 IGHA1P01876 353 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 CRYGBP07316 175 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 LIMS3P0CW19 117 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 LIMS4P0CW20 117 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 PPICP45877 212 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 CDK5R1Q15078 307 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 TMEM78Q5T7P6 136 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 C8orf82Q6P1X6 216 aaPredicted RBP4.76□□□□□ -1.65
EBF1-211ENST00000622875 ZNF474Q6S9Z5 364 aaPredicted RBP4.76□□□□□ -1.65
EBF1-211ENST00000622875 LCNL1Q6ZST4 164 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 SFXN3Q9BWM7 321 aa4.76□□□□□ -1.65
EBF1-211ENST00000622875 TMEM150CB9EJG8 249 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms