RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 FXYD4P59646 89 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 ZNF818PQ6ZRF7 136 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 GDPD1Q8N9F7 314 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 CD300LFQ8TDQ1 290 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 GIMAP1Q8WWP7 306 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 UBQLN2Q9UHD9 624 aa18.5■□□□□ 0.55
PTPRF-216ENST00000617451 A0A0A6YYH2 397 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 A6NJ64 397 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 UBE2CO00762 179 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 CYB5BO43169 146 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 S1PR2O95136 353 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 DEFB135Q30KP9 77 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 THOC7Q6I9Y2 204 aaKnown RBP18.49■□□□□ 0.55
PTPRF-216ENST00000617451 CEMP1Q6PRD7 247 aaPredicted RBP18.49■□□□□ 0.55
PTPRF-216ENST00000617451 DMBX1Q8NFW5 382 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 OR51H1Q8NH63 302 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 FCGR1BQ92637 280 aa18.49■□□□□ 0.55
PTPRF-216ENST00000617451 DAZ1Q9NQZ3 744 aaKnown RBP18.49■□□□□ 0.55
PTPRF-216ENST00000617451 OR2T8A6NH00 312 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 FCER2P06734 321 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 SERPINE2P07093 398 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 CLEC2LP0C7M8 214 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 TRAPPC2P0DI81 140 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 TRAPPC2BP0DI82 140 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 OR13C7P0DN81 318 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 RPA2P15927 270 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 MXD1Q05195 221 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 WT1-ASQ06250 92 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 HSD17B13Q7Z5P4 300 aaPredicted RBP18.48■□□□□ 0.55
PTPRF-216ENST00000617451 BSCL2Q96G97 398 aaPredicted RBP18.48■□□□□ 0.55
PTPRF-216ENST00000617451 AUNIPQ9H7T9 357 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 COMMD9Q9P000 198 aa18.48■□□□□ 0.55
PTPRF-216ENST00000617451 KIR2DL5BA0A0G2JN68 375 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 KIR2DL5BA0A0G2JPC4 375 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 TEX50A0A1B0GTY4 177 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 ATF4P18848 351 aaPredicted RBP18.47■□□□□ 0.55
PTPRF-216ENST00000617451 ODF3L2Q3SX64 289 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 AADACL3Q5VUY0 350 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 LAMTOR1Q6IAA8 161 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 SLC25A24Q6NUK1 477 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 KIR2DL5AQ8N109 375 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 OR5AP2Q8NGF4 316 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 KIR2DL5BQ8NHK3 375 aa18.47■□□□□ 0.55
PTPRF-216ENST00000617451 GNRHRP30968 328 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 IDNKQ5T6J7 187 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 SPSB3Q6PJ21 355 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 TMEM17Q86X19 198 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 STPG3Q8N7X2 389 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 OR1L8Q8NGR8 309 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 RNF183Q96D59 192 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 ATP6V0BQ99437 205 aa18.46■□□□□ 0.55
PTPRF-216ENST00000617451 NDUFA4O00483 81 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 MFAP2P55001 183 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 CHRDL1Q9BU40 450 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 RNF167Q9H6Y7 350 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 DIABLOQ9NR28 239 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 NDUFA4L2Q9NRX3 87 aa18.45■□□□□ 0.54
PTPRF-216ENST00000617451 F11RQ9Y624 299 aaKnown RBP18.45■□□□□ 0.54
PTPRF-216ENST00000617451 MARCH11A6NNE9 402 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 F8W735 103 aaPredicted RBP18.44■□□□□ 0.54
PTPRF-216ENST00000617451 CBX5P45973 191 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 SCARB1Q8WTV0 552 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 BORCS5Q969J3 196 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 C21orf62Q9NYP8 219 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 DNAH10Q8IVF4 4471 aa18.44■□□□□ 0.54
PTPRF-216ENST00000617451 IGHV3-21A0A0B4J1V1 117 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 OR4C46A6NHA9 309 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 K7EMT4 169 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 ADMP35318 185 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 HERV-K104P61576 105 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 ERVK-16P61578 105 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 LSM10Q969L4 123 aaKnown RBP18.43■□□□□ 0.54
PTPRF-216ENST00000617451 C20orf24Q9BUV8 137 aa18.43■□□□□ 0.54
PTPRF-216ENST00000617451 KLK5Q9Y337 293 aaPredicted RBP18.43■□□□□ 0.54
PTPRF-216ENST00000617451 RPL35AP18077 110 aaKnown RBP18.42■□□□□ 0.54
PTPRF-216ENST00000617451 F2RP25116 425 aa18.42■□□□□ 0.54
PTPRF-216ENST00000617451 DHRS11Q6UWP2 260 aa18.42■□□□□ 0.54
PTPRF-216ENST00000617451 CADM3Q8N126 398 aa18.42■□□□□ 0.54
PTPRF-216ENST00000617451 GALNT14Q96FL9 552 aa18.42■□□□□ 0.54
PTPRF-216ENST00000617451 HINT2Q9BX68 163 aa18.42■□□□□ 0.54
PTPRF-216ENST00000617451 IGHV3OR16-8A0A075B7F1 116 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 MEIS3P1A6NDR6 274 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 K7EIM0 57 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 ZNF207O43670 478 aaKnown RBP18.41■□□□□ 0.54
PTPRF-216ENST00000617451 PGLYRP1O75594 196 aaPredicted RBP18.41■□□□□ 0.54
PTPRF-216ENST00000617451 TMEM217Q8N7C4 229 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 MAP6D1Q9H9H5 199 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 EHFQ9NZC4 300 aa18.41■□□□□ 0.54
PTPRF-216ENST00000617451 LOC100506127A0A0U1RQW1 187 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 C15orf62A8K5M9 175 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 KRASP01116 189 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 RLN1P04808 185 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 CTSDP07339 412 aaPredicted RBP18.4■□□□□ 0.54
PTPRF-216ENST00000617451 FCAMRQ8WWV6 532 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 MOB3AQ96BX8 217 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 YTHDF1Q9BYJ9 559 aaKnown RBP18.4■□□□□ 0.54
PTPRF-216ENST00000617451 NSG2Q9Y328 171 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 OR51B2Q9Y5P1 312 aa18.4■□□□□ 0.54
PTPRF-216ENST00000617451 LPAR6P43657 344 aa18.39■□□□□ 0.53
PTPRF-216ENST00000617451 RFX2P48378 723 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms