RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 ALDH3B2P48448 385 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 PHLDA2Q53GA4 152 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 ADAMTSL5Q6ZMM2 481 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 GPR141Q7Z602 305 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 GDPD1Q8N9F7 314 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 OR5B3Q8NH48 314 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 VN1R17PQ8TDU5 208 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 LSM10Q969L4 123 aaKnown RBP13.8□□□□□ -0.2
VCX3A-203ENST00000612369 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 EXTL2Q9UBQ6 330 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 MFSD2BA6NFX1 497 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 IFNA6P05013 189 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 CLEC3BP05452 202 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 FOLR2P14207 255 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 G6PCP35575 357 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
VCX3A-203ENST00000612369 RNASE10Q5GAN6 216 aaKnown RBP13.79□□□□□ -0.2
VCX3A-203ENST00000612369 TBC1D26Q86UD7 250 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 ARRDC1Q8N5I2 433 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 ZNF486Q96H40 463 aaPredicted RBP13.79□□□□□ -0.2
VCX3A-203ENST00000612369 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 MTFP1Q9UDX5 166 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 OR51B2Q9Y5P1 312 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 S4R3C0 116 aa13.79□□□□□ -0.2
VCX3A-203ENST00000612369 IZUMO1RA6ND01 250 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 A8MWP6 167 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 WT1-ASQ06250 92 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 OR52I2Q8NH67 350 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 ATP6V0BQ99437 205 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 TM2D3Q9BRN9 247 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 KLK11Q9UBX7 282 aa13.78□□□□□ -0.2
VCX3A-203ENST00000612369 M0QYG6 137 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 CBLN1P23435 193 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 SLC25A24Q6NUK1 477 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 LHFPL1Q86WI0 220 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 SEC22AQ96IW7 307 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 ABHD1Q96SE0 405 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 TUBA4BQ9H853 241 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 ZC4H2Q9NQZ6 224 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 TMEM14BQ9NUH8 114 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 SLC2A8Q9NY64 477 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 NSG2Q9Y328 171 aa13.77□□□□□ -0.21
VCX3A-203ENST00000612369 F11RQ9Y624 299 aaKnown RBP13.77□□□□□ -0.21
VCX3A-203ENST00000612369 HUWE1Q7Z6Z7 4374 aaKnown RBP13.77□□□□□ -0.21
VCX3A-203ENST00000612369 ZNF320A2RRD8 509 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 C15orf61A6NNL5 157 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 ZNF785A8K8V0 405 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 CD3DP04234 171 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 RND3P61587 244 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 MRPS10P82664 201 aaKnown RBP13.76□□□□□ -0.21
VCX3A-203ENST00000612369 PLET1Q6UQ28 207 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 MARC2Q969Z3 335 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 BCL7BQ9BQE9 202 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
VCX3A-203ENST00000612369 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 GPR183P32249 361 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 ELLP55199 621 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-203ENST00000612369 SSBP1Q04837 148 aaKnown RBP13.75□□□□□ -0.21
VCX3A-203ENST00000612369 RNASE12Q5GAN4 147 aaKnown RBP13.75□□□□□ -0.21
VCX3A-203ENST00000612369 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 TMEM229BQ8NBD8 167 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 RAB2BQ8WUD1 216 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 RABL2AQ9UBK7 228 aaPredicted RBP13.75□□□□□ -0.21
VCX3A-203ENST00000612369 RABL2BQ9UNT1 228 aa13.75□□□□□ -0.21
VCX3A-203ENST00000612369 GABARAPH6UMI1 98 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 RGS5O15539 181 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 TGOLN2O43493 480 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 CD74P04233 296 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 PGAM2P15259 253 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 TAS2R19P59542 299 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 CD81P60033 236 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 BSCL2Q96G97 398 aaPredicted RBP13.74□□□□□ -0.21
VCX3A-203ENST00000612369 NEURL2Q9BR09 285 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 UFC1Q9Y3C8 167 aa13.74□□□□□ -0.21
VCX3A-203ENST00000612369 ATG12O94817 140 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 IGKV1-39P01597 117 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 IGKV1D-39P04432 117 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 C8orf88P0DMB2 117 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 TMBIM6P55061 237 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 SPCS2Q15005 226 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 ZNF57Q68EA5 555 aaPredicted RBP13.73□□□□□ -0.21
VCX3A-203ENST00000612369 CLVS1Q8IUQ0 354 aaPredicted RBP13.73□□□□□ -0.21
VCX3A-203ENST00000612369 UXS1Q8NBZ7 420 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 OR1P1Q8NH06 330 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 TERB2Q8NHR7 220 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 ZFAND1Q8TCF1 268 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 SPATA25Q9BR10 227 aa13.73□□□□□ -0.21
VCX3A-203ENST00000612369 ZNF436Q9C0F3 470 aaPredicted RBP13.73□□□□□ -0.21
VCX3A-203ENST00000612369 C21orf62Q9NYP8 219 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms