RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 MFSD2BA6NFX1 497 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 SULT1C2O00338 296 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 UBE2CO00762 179 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 TGOLN2O43493 480 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 SERPINE2P07093 398 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 TRAPPC2P0DI81 140 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 TRAPPC2BP0DI82 140 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 F2RP25116 425 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 RPS19P39019 145 aaKnown RBP10.19□□□□□ -0.78
TRIM28-211ENST00000597968 HERV-K104P61576 105 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 LAMTOR1Q6IAA8 161 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 ZNF818PQ6ZRF7 136 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 C19orf35Q6ZS72 473 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 Q6ZWC4 215 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 OR2C3Q8N628 320 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 OR1L8Q8NGR8 309 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 DAZ1Q9NQZ3 744 aaKnown RBP10.19□□□□□ -0.78
TRIM28-211ENST00000597968 TMEM140Q9NV12 185 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 GAR1Q9NY12 217 aaKnown RBP10.19□□□□□ -0.78
TRIM28-211ENST00000597968 FKBP11Q9NYL4 201 aa10.19□□□□□ -0.78
TRIM28-211ENST00000597968 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 K7EMT4 169 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 NDUFA4O00483 81 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 TSPAN4O14817 238 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 GNRHRP30968 328 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 GPR183P32249 361 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 APOC4P55056 127 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 TAS2R46P59540 309 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 FXYD4P59646 89 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 AADACL3Q5VUY0 350 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 BTNL8Q6UX41 500 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 CMTM1Q8IZ96 169 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 TSPAN14Q8NG11 270 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 CACNG8Q8WXS5 425 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 TMEM190Q8WZ59 177 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 TSC22D3Q99576 134 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 RETNQ9HD89 108 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 ANAPC10Q9UM13 185 aa10.18□□□□□ -0.78
TRIM28-211ENST00000597968 KIR2DL5BA0A0G2JN68 375 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 KIR2DL5BA0A0G2JPC4 375 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 IGHV3-23P01764 117 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 REG1AP05451 166 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 NAT1P18440 290 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 ZNF585BQ52M93 769 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 TM4SF20Q53R12 229 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 UNQ9165/PRO28630Q6UXU0 137 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 KIR2DL5AQ8N109 375 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 OR5B3Q8NH48 314 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 LSM10Q969L4 123 aaKnown RBP10.17□□□□□ -0.78
TRIM28-211ENST00000597968 MOB3AQ96BX8 217 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 TMEM56Q96MV1 263 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 WFDC10AQ9H1F0 79 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 IFT46Q9NQC8 304 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 NDUFA4L2Q9NRX3 87 aa10.17□□□□□ -0.78
TRIM28-211ENST00000597968 F11RQ9Y624 299 aaKnown RBP10.17□□□□□ -0.78
TRIM28-211ENST00000597968 A0A087WXM4 84 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 C15orf62A8K5M9 175 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 SCAF4O95104 1147 aaKnown RBP10.16□□□□□ -0.78
TRIM28-211ENST00000597968 S1PR2O95136 353 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 EDN2P20800 178 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 S100GP29377 79 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 BMI1P35226 326 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
TRIM28-211ENST00000597968 TNFRSF9Q07011 255 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 UBE2NLQ5JXB2 153 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 LPCAT3Q6P1A2 487 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 TMEM17Q86X19 198 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 OR51H1Q8NH63 302 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 DGCR14Q96DF8 476 aaKnown RBP10.16□□□□□ -0.78
TRIM28-211ENST00000597968 EHFQ9NZC4 300 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 PRNDQ9UKY0 176 aa10.16□□□□□ -0.78
TRIM28-211ENST00000597968 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 OR4C46A6NHA9 309 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 PGLYRP1O75594 196 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-211ENST00000597968 SNAPC5O75971 98 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 CD5P06127 495 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 OR13C7P0DN81 318 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-211ENST00000597968 RFX2P48378 723 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 WT1-ASQ06250 92 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 SLC25A24Q6NUK1 477 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 SAMD12Q8N8I0 201 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 OR6F1Q8NGZ6 308 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 CMTM3Q96MX0 182 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 ZNF2Q9BSG1 426 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-211ENST00000597968 C21orf62Q9NYP8 219 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 S4R3C0 116 aa10.15□□□□□ -0.78
TRIM28-211ENST00000597968 NUPR2A6NF83 97 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 GPR31O00270 319 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 PMP2P02689 132 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 RPA2P15927 270 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 TAS2R20P59543 309 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 NCS1P62166 190 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 RELQ04864 619 aaPredicted RBP10.14□□□□□ -0.79
TRIM28-211ENST00000597968 TMEM69Q5SWH9 247 aa10.14□□□□□ -0.79
TRIM28-211ENST00000597968 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms