RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 NDUFB6O95139 128 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 AKR1C4P17516 323 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 PSG5Q15238 335 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 OSR1Q8TAX0 266 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 C5orf66Q9H5L9 145 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 TUBA4BQ9H853 241 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 TBC1D24Q9ULP9 559 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 HECTD4Q9Y4D8 3996 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 C3orf85A0A1B0GTC6 90 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 HPRT1P00492 218 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 HRASP01112 189 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 SERPINE2P07093 398 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 CSN3P07498 182 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 LPAR6P43657 344 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 IFITM3Q01628 133 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 VMA21Q3ZAQ7 101 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 ENKURQ8TC29 256 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 AIFM2Q9BRQ8 373 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 KCNIP3Q9Y2W7 256 aa12.49□□□□□ -0.41
SHKBP1-215ENST00000597649 H0Y980 276 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 SPDEFO95238 335 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 CA2P00918 260 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 ZP3P21754 424 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 BTCP35070 178 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 SYNJ2BPP57105 145 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 TAS2R31P59538 309 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 SSBP2P81877 361 aaPredicted RBP12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-215ENST00000597649 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 SLC25A17O43808 307 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 TCRBP04435 133 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 ANXA3P12429 323 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 BRWD1-AS2P59051 145 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 ERVK-16P61578 105 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 DEFA5Q01523 94 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 PLEKHA2Q9HB19 425 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 FAM212BQ9NTI7 297 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 PCLOQ9Y6V0 5065 aa12.47□□□□□ -0.41
SHKBP1-215ENST00000597649 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 S1PR2O95136 353 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 NQO2P16083 231 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 DHODHQ02127 395 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 FXYD3Q14802 87 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 SP6Q3SY56 376 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 COMMD9Q9P000 198 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 FLVCR2Q9UPI3 526 aa12.46□□□□□ -0.41
SHKBP1-215ENST00000597649 RYR1P21817 5038 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 ATG12O94817 140 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 OR5AC1P0C628 307 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 RPA2P15927 270 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 VAMP1P23763 118 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 UBE2KP61086 200 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 PJVKQ0ZLH3 352 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 IL17DQ8TAD2 202 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 TMEM230Q96A57 120 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 C20orf85Q9H1P6 137 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 PLEKHA3Q9HB20 300 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
SHKBP1-215ENST00000597649 TRAV6A0A075B6T7 132 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 RBMY1BA6NDE4 496 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 RBMY1EA6NEQ0 496 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 H3BUA1 57 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 CREBL2O60519 120 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 KRASP01116 189 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 RBMY1DP0C7P1 496 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 SAA1P0DJI8 122 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 VKORC1L1Q8N0U8 176 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 RNASE11Q8TAA1 199 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 NUDT15Q9NV35 164 aa12.44□□□□□ -0.42
SHKBP1-215ENST00000597649 A0A0G2JLM5 398 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms