RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GPX8Q8TED1 209 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 AP3S1Q92572 193 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 GPHA2Q96T91 129 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 TECRQ9NZ01 308 aaKnown RBP12.93□□□□□ -0.34
RETREG3-210ENST00000590541 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 NDUFB8O95169 186 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 PMP2P02689 132 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 PRH1P02810 166 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 EIF4EP06730 217 aaKnown RBP12.92□□□□□ -0.34
RETREG3-210ENST00000590541 CTRB1P17538 263 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 F2RP25116 425 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 ERVK-16P61578 105 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 CTRB2Q6GPI1 263 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 HSD17B13Q7Z5P4 300 aaPredicted RBP12.92□□□□□ -0.34
RETREG3-210ENST00000590541 DMBX1Q8NFW5 382 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 COMMD5Q9GZQ3 224 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 FAM212BQ9NTI7 297 aaPredicted RBP12.92□□□□□ -0.34
RETREG3-210ENST00000590541 FBXL7Q9UJT9 491 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 DMRT1Q9Y5R6 373 aa12.92□□□□□ -0.34
RETREG3-210ENST00000590541 GPR31O00270 319 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 UPK2O00526 184 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 CYB5BO43169 146 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 PGLYRP1O75594 196 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-210ENST00000590541 OR2J3O76001 311 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 GABARAPO95166 117 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 RCVRNP35243 200 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 HRH1P35367 487 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 LYSMD2Q8IV50 215 aa12.91□□□□□ -0.34
RETREG3-210ENST00000590541 E7EUB6 86 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 GGCTO75223 188 aaKnown RBP12.9□□□□□ -0.34
RETREG3-210ENST00000590541 DEFA4P12838 97 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-210ENST00000590541 OR2B8PP59922 312 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 TSPAN5P62079 268 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 TMEM61Q8N0U2 210 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 C15orf40Q8WUR7 153 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 EEF1AKMT3Q96AZ1 226 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
RETREG3-210ENST00000590541 CXorf58Q96LI9 332 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 THYN1Q9P016 225 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
RETREG3-210ENST00000590541 TRBV7-1A0A0A6YYK4 115 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 A0A1B0GW64 132 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 PPP5D1E7EU14 171 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 LGALS9O00182 355 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 S1PR2O95136 353 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
RETREG3-210ENST00000590541 RLN1P04808 185 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 AREGP15514 252 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 ZNF182P17025 639 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-210ENST00000590541 ELK1P19419 428 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 CBLN1P23435 193 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 BMI1P35226 326 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 CTF1Q16619 201 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 OR52B4Q8NGK2 314 aa12.89□□□□□ -0.35
RETREG3-210ENST00000590541 QTRT1Q9BXR0 403 aaKnown RBP12.89□□□□□ -0.35
RETREG3-210ENST00000590541 SPRY2O43597 315 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 HPGDSO60760 199 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 SMIM18P0DKX4 95 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 UCP3P55916 312 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 SNX29P2Q8IUI4 249 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 PHLDA1Q8WV24 401 aaPredicted RBP12.88□□□□□ -0.35
RETREG3-210ENST00000590541 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
RETREG3-210ENST00000590541 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 MLXQ9UH92 298 aa12.88□□□□□ -0.35
RETREG3-210ENST00000590541 IGLV11-55A0A075B6I3 123 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 IGLC7A0M8Q6 106 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 CGB1A6NKQ9 187 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 SNAPC5O75971 98 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 OR2C1O95371 312 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 TRAPPC2P0DI81 140 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 TRAPPC2BP0DI82 140 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 LPAR6P43657 344 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 PRR20EP86478 221 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 PRR20CP86479 221 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 PRR20DP86480 221 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 PRR20BP86481 221 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 PRR20AP86496 221 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 ZNF57Q68EA5 555 aaPredicted RBP12.87□□□□□ -0.35
RETREG3-210ENST00000590541 Q6ZWC4 215 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FCAMRQ8WWV6 532 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 TSC22D3Q99576 134 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 FXYD6Q9H0Q3 95 aa12.87□□□□□ -0.35
RETREG3-210ENST00000590541 SCAF4O95104 1147 aaKnown RBP12.86□□□□□ -0.35
RETREG3-210ENST00000590541 TBPP20226 339 aa12.86□□□□□ -0.35
RETREG3-210ENST00000590541 ARL3P36405 182 aa12.86□□□□□ -0.35
RETREG3-210ENST00000590541 DEFB135Q30KP9 77 aa12.86□□□□□ -0.35
RETREG3-210ENST00000590541 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms