RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 GPR141Q7Z602 305 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 CROCCP3Q8IVE0 287 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 ODF3L1Q8IXM7 274 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 OR5T1Q8NG75 326 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 RHOXF1Q8NHV9 184 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 MRPL30Q8TCC3 161 aaKnown RBP4.22□□□□□ -1.73
DNMT1-220ENST00000589351 RGP1Q92546 391 aaPredicted RBP4.22□□□□□ -1.73
DNMT1-220ENST00000589351 SMIM19Q96E16 107 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 FAM103A1Q9BTL3 118 aaKnown RBP4.22□□□□□ -1.73
DNMT1-220ENST00000589351 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
DNMT1-220ENST00000589351 BANF2Q9H503 90 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 FGF20Q9NP95 211 aaPredicted RBP4.22□□□□□ -1.73
DNMT1-220ENST00000589351 ZNF581Q9P0T4 197 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 FBXO7Q9Y3I1 522 aa4.22□□□□□ -1.73
DNMT1-220ENST00000589351 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 H0YJW9 148 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 EI24O14681 340 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PROP1O75360 226 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 OR2A4O95047 310 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 LIMS3P0CW19 117 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 LIMS4P0CW20 117 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 CT45A6P0DMU7 189 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 CT45A5P0DMU8 189 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 CT45A7P0DMV0 189 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 IGFBP3P17936 291 aaPredicted RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 DUTP33316 252 aaKnown RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 CEACAM6P40199 344 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 RANBP1P43487 201 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 FHITP49789 147 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 TAS2R43P59537 309 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PLP1P60201 277 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 NDPQ00604 133 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 GNMTQ14749 295 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 HMGN3Q15651 99 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 ANXA2RQ3ZCQ2 193 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 GLT8D1Q68CQ7 371 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 DMKNQ6E0U4 476 aaPredicted RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF343Q6P1L6 599 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 ZFP1Q6P2D0 407 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 MOB1BQ7L9L4 216 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 SLC16A13Q7RTY0 426 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PDPNQ86YL7 162 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 THAP8Q8NA92 274 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF555Q8NEP9 628 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 GRPEL2Q8TAA5 225 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 DYNLRB2Q8TF09 96 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 DDB2Q92466 427 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PPP1R14BQ96C90 147 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 RBMXL1Q96E39 390 aaKnown RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 ABHD14BQ96IU4 210 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PHB2Q99623 299 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 SULT4A1Q9BR01 284 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 NEURL2Q9BR09 285 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 THAP7Q9BT49 309 aaPredicted RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 GSN-AS1Q9NRJ2 163 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 PLEKHJ1Q9NW61 149 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 COA4Q9NYJ1 87 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 NAGKQ9UJ70 344 aa4.21□□□□□ -1.74
DNMT1-220ENST00000589351 EXOSC1Q9Y3B2 195 aaKnown RBP4.21□□□□□ -1.74
DNMT1-220ENST00000589351 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TRBV5-7A0A0A0MS05 114 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TRBV5-5A0A0J9YX44 114 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 LOC105371267A0A1B0GV96 52 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 RBMY1BA6NDE4 496 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 RBMY1EA6NEQ0 496 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 OR11H12B2RN74 326 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 SIVA1O15304 175 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 MPPED1O15442 326 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 NDUFB8O95169 186 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 LY6G6CO95867 125 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 FCER2P06734 321 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 RBMY1DP0C7P1 496 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 ID1P41134 155 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 CBX5P45973 191 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 ATP5G2Q06055 141 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TPBGQ13641 420 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 GUCA2BQ16661 112 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 RPL39P5Q59GN2 51 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 LINC00322Q6ZN03 302 aaPredicted RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 STX12Q86Y82 276 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 CBR4Q8N4T8 237 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 OR4D5Q8NGN0 318 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 PYDC1Q8WXC3 89 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 PINX1Q96BK5 328 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TMEM80Q96HE8 168 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 URM1Q9BTM9 101 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 FAAP24Q9BTP7 215 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 NDUFAF3Q9BU61 184 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 IFI27L2Q9H2X8 130 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 PLEKHA3Q9HB20 300 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TECRQ9NZ01 308 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 DIMT1Q9UNQ2 313 aaKnown RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 KLK5Q9Y337 293 aaPredicted RBP4.2□□□□□ -1.74
DNMT1-220ENST00000589351 TMED3Q9Y3Q3 217 aa4.2□□□□□ -1.74
DNMT1-220ENST00000589351 RYR2Q92736 4967 aa4.19□□□□□ -1.74
DNMT1-220ENST00000589351 TRAV8-7A0A075B6U6 113 aa4.19□□□□□ -1.74
DNMT1-220ENST00000589351 RAB19A4D1S5 217 aa4.19□□□□□ -1.74
DNMT1-220ENST00000589351 NUPR2A6NF83 97 aa4.19□□□□□ -1.74
DNMT1-220ENST00000589351 FAM223BA6NKX1 122 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms