RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RTL8BQ17RB0 113 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 C17orf58Q2M2W7 97 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 AKIRIN2Q53H80 203 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 OR2B11Q5JQS5 317 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 FFAR4Q5NUL3 377 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 FAM71F2Q6NXP2 309 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 LCN15Q6UWW0 184 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 TPRX1Q8N7U7 411 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 CYB561D1Q8N8Q1 229 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 ZNRF1Q8ND25 227 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 NUDT10Q8NFP7 164 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 OR10G9Q8NGN4 311 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 OR10G7Q8NGN6 311 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 DDB2Q92466 427 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 RAB1CQ92928 201 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 NEIL1Q96FI4 390 aaPredicted RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 NUDT11Q96G61 164 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 GAFA1Q96PS6 74 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 IFI27L2Q9H2X8 130 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 SAV1Q9H4B6 383 aaPredicted RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 DYNLRB1Q9NP97 96 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 HEYLQ9NQ87 328 aaPredicted RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 WDR83OSQ9Y284 106 aa4.7□□□□□ -1.66
SDF2-206ENST00000587788 ANKRD17O75179 2603 aaKnown RBP4.7□□□□□ -1.66
SDF2-206ENST00000587788 CENPEQ02224 2701 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 ANKHD1Q8IWZ3 2542 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 ABCA4P78363 2273 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 AKAP9Q99996 3911 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PPIAL4EA0A075B759 164 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 ZFP92A6NM28 416 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 C15orf61A6NNL5 157 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 C15orf62A8K5M9 175 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PPIAL4DF5H284 164 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 CLDN34H7C241 214 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PDE6DO43924 150 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PROP1O75360 226 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 VENTXO95231 258 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PLAUP00749 431 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 IFNA10P01566 189 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OPN1MWP04001 364 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PPIAL4FP0DN26 164 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OPN1MW2P0DN77 364 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OPN1MW3P0DN78 364 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 ELLP55199 621 aaPredicted RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 HSPE1P61604 102 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 CCL8P80075 99 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 MEF2BQ02080 365 aaPredicted RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 HABP2Q14520 560 aaPredicted RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 ZNF726P1Q15940 193 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 LTC4SQ16873 150 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 TMEM241Q24JQ0 296 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 CT45A1Q5HYN5 189 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 HEPN1Q6WQI6 88 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 SLC25A48Q6ZT89 311 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 LINC00518Q8N0U6 118 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 RPP25LQ8N5L8 163 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 FAM24BQ8N5W8 94 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 ZNF439Q8NDP4 499 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OR13D1Q8NGV5 346 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OR4A5Q8NH83 315 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 CT45A3Q8NHU0 189 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 OSR1Q8TAX0 266 aaPredicted RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 NANPQ8TBE9 248 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 AJUBAQ96IF1 538 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 BTF3L4Q96K17 158 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 YPEL4Q96NS1 127 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 SSX3Q99909 188 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 DCTN5Q9BTE1 182 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 QTRT1Q9BXR0 403 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 NPCDR1Q9BY65 106 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 SAP30LQ9HAJ7 183 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 NPVFQ9HCQ7 196 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 TMEM14BQ9NUH8 114 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 TMEM140Q9NV12 185 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 METTL1Q9UBP6 276 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 NAT8Q9UHE5 227 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PPIAL4AQ9Y536 164 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 RFNGQ9Y644 331 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 PRRC2AP48634 2157 aaKnown RBP4.69□□□□□ -1.66
SDF2-206ENST00000587788 ABCA12Q86UK0 2595 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 CELSR1Q9NYQ6 3014 aa4.69□□□□□ -1.66
SDF2-206ENST00000587788 CADP27708 2225 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 SAA2-SAA4A0A096LPE2 208 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 A0A1W2PPH5 198 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 A0A1W2PPV4 95 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 C5orf52A6NGY3 159 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 ZNF727A8MUV8 499 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 F6UZH7 168 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 TMEM178BH3BS89 294 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 UBE2CO00762 179 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 NDUFB3O43676 98 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 KBTBD11O94819 623 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 CYB5R3P00387 301 aaPredicted RBP4.68□□□□□ -1.66
SDF2-206ENST00000587788 MT-CO2P00403 227 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 APOA2P02652 100 aa4.68□□□□□ -1.66
SDF2-206ENST00000587788 TFF1P04155 84 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms