RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SERPINE2P07093 398 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 OR13C7P0DN81 318 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 SCAND1P57086 179 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 NR2C2APQ86WQ0 139 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 GDPD1Q8N9F7 314 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 OR1L8Q8NGR8 309 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 NRG4Q8WWG1 115 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 C20orf24Q9BUV8 137 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 TXNL4BQ9NX01 149 aaKnown RBP13.3□□□□□ -0.28
MKS1-209ENST00000580127 RHBDL2Q9NX52 303 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 UBQLN2Q9UHD9 624 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 A0A0A6YYH2 397 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 A6NJ64 397 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 SNAPC5O75971 98 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 CBX5P45973 191 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
MKS1-209ENST00000580127 CGB1A6NKQ9 187 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 RPA2P15927 270 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 FXYD4P59646 89 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 AADACL3Q5VUY0 350 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 TSPAN14Q8NG11 270 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 FCGR1BQ92637 280 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 CMTM3Q96MX0 182 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 FKBP11Q9NYL4 201 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 C21orf62Q9NYP8 219 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 COMMD9Q9P000 198 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
MKS1-209ENST00000580127 TEX50A0A1B0GTY4 177 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 IFNA4P05014 189 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.29
MKS1-209ENST00000580127 PSMB9P28065 219 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 HERV-K104P61576 105 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 LGALS14Q8TCE9 139 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 TMEM56Q96MV1 263 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 HINT2Q9BX68 163 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 MFFQ9GZY8 342 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 HYDINQ4G0P3 5121 aa13.27□□□□□ -0.29
MKS1-209ENST00000580127 TRAV3A0A0B4J244 114 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 GABARAPL2P60520 117 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 RELQ04864 619 aaPredicted RBP13.26□□□□□ -0.29
MKS1-209ENST00000580127 UBE2UQ5VVX9 321 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 LGALS9CQ6DKI2 356 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 OR5AP2Q8NGF4 316 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 PHLDA1Q8WV24 401 aaPredicted RBP13.26□□□□□ -0.29
MKS1-209ENST00000580127 LSM10Q969L4 123 aaKnown RBP13.26□□□□□ -0.29
MKS1-209ENST00000580127 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
MKS1-209ENST00000580127 MPTX1A8MV57 137 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 CD5P06127 495 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 CTSDP07339 412 aaPredicted RBP13.25□□□□□ -0.29
MKS1-209ENST00000580127 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 Q56UQ5 140 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 IZUMO2Q6UXV1 221 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 TMEM17Q86X19 198 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 CMTM1Q8IZ96 169 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 CADM3Q8N126 398 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 GVQW1Q8N7I0 195 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 OR5B3Q8NH48 314 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 SCARB1Q8WTV0 552 aa13.25□□□□□ -0.29
MKS1-209ENST00000580127 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
MKS1-209ENST00000580127 NUPL2O15504 423 aaKnown RBP13.24□□□□□ -0.29
MKS1-209ENST00000580127 TMEM127O75204 238 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 S1PR2O95136 353 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 F2RP25116 425 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 S100GP29377 79 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 SDC2P34741 201 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 EWSR1Q01844 656 aaKnown RBP eCLIP13.24□□□□□ -0.29
MKS1-209ENST00000580127 WT1-ASQ06250 92 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 RARRES2Q99969 163 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 NDUFA4L2Q9NRX3 87 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 PRNDQ9UKY0 176 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 RAB26Q9ULW5 256 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 OR51B2Q9Y5P1 312 aa13.24□□□□□ -0.29
MKS1-209ENST00000580127 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 YIF1AO95070 293 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 PTHLHP12272 177 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 ADMP35318 185 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 MXD1Q05195 221 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 AUNIPQ9H7T9 357 aa13.23□□□□□ -0.29
MKS1-209ENST00000580127 KRASP01116 189 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms