RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 FOLR2P14207 255 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 CD300EQ496F6 205 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-215ENST00000577085 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 Q8N1Y9 231 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 OR10W1Q8NGF6 305 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
SF3B3-215ENST00000577085 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 SLC2A8Q9NY64 477 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 KLK11Q9UBX7 282 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
SF3B3-215ENST00000577085 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 NOL3O60936 208 aaKnown RBP11.77□□□□□ -0.53
SF3B3-215ENST00000577085 TBPP20226 339 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 GPR183P32249 361 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 UCP3P55916 312 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 CD81P60033 236 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 ZNF585BQ52M93 769 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 PLET1Q6UQ28 207 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 OR5B3Q8NH48 314 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 OR4A16Q8NH70 328 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 PALMDQ9NP74 551 aa11.77□□□□□ -0.53
SF3B3-215ENST00000577085 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-215ENST00000577085 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
SF3B3-215ENST00000577085 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 A8MZ25 164 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 TPPPO94811 219 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
SF3B3-215ENST00000577085 WT1-ASQ06250 92 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 KLK9Q2XQG4 91 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 CLVS1Q8IUQ0 354 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-215ENST00000577085 LAX1Q8IWV1 398 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 CADM3Q8N126 398 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 OR52I2Q8NH67 350 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 NDUFA4L2Q9NRX3 87 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 KLK9Q9UKQ9 250 aa11.76□□□□□ -0.53
SF3B3-215ENST00000577085 CD3DP04234 171 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 CBLN1P23435 193 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 TAS2R19P59542 299 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 ZNF502Q8TBZ5 544 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 RAB2BQ8WUD1 216 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 ZNF486Q96H40 463 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-215ENST00000577085 MTFP1Q9UDX5 166 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 DMRT1Q9Y5R6 373 aa11.75□□□□□ -0.53
SF3B3-215ENST00000577085 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 ATG12O94817 140 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 PI3P19957 117 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 ALDH3B2P48448 385 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 PPP5CP53041 499 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 PIGPP57054 158 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 SCGB2B2Q4G0G5 96 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-215ENST00000577085 UBAC2Q8NBM4 344 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 ZFAND1Q8TCF1 268 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 ABHD1Q96SE0 405 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 NEURL2Q9BR09 285 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 COPZ2Q9P299 210 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 UFC1Q9Y3C8 167 aa11.74□□□□□ -0.53
SF3B3-215ENST00000577085 F11RQ9Y624 299 aaKnown RBP11.74□□□□□ -0.53
SF3B3-215ENST00000577085 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 A8MWP6 167 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 GABARAPH6UMI1 98 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 TGOLN2O43493 480 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 RAB3DO95716 219 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 MRPS10P82664 201 aaKnown RBP11.73□□□□□ -0.53
SF3B3-215ENST00000577085 SPCS2Q15005 226 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 Q56UQ5 140 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 ADAMTSL5Q6ZMM2 481 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 CCDC71LQ8N9Z2 235 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 UXS1Q8NBZ7 420 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-215ENST00000577085 SPATA25Q9BR10 227 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 THAP7Q9BT49 309 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-215ENST00000577085 C21orf62Q9NYP8 219 aa11.73□□□□□ -0.53
SF3B3-215ENST00000577085 IGHV3-21A0A0B4J1V1 117 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 TMEM213A2RRL7 107 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 C3orf84H3BNL1 204 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 EDN2P20800 178 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 AKR1C2P52895 323 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 RND3P61587 244 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 SSBP1Q04837 148 aaKnown RBP11.72□□□□□ -0.53
SF3B3-215ENST00000577085 IL18Q14116 193 aa11.72□□□□□ -0.53
SF3B3-215ENST00000577085 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms