RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ATG12O94817 140 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 SNAPINO95295 136 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 CDS2O95674 445 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 PPYP01298 95 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 IGKV1D-12P01611 117 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 HLA-HP01893 362 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 OR5AC1P0C628 307 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 KITLGP21583 273 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 IL32P24001 234 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 HAAOP46952 286 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 MEOX2P50222 304 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 RAB5CP51148 216 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 GPM6AP51674 278 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TMEM33P57088 247 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 UBE2NP61088 152 aaKnown RBP2.73□□□□□ -1.97
UBR1-211ENST00000569971 GNG3P63215 75 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 ARG2P78540 354 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TGFBR3Q03167 851 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 IL15RAQ13261 267 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 GNMTQ14749 295 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 HMGN3Q15651 99 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TBC1D28Q2M2D7 210 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 KLF17Q5JT82 389 aaPredicted RBP2.73□□□□□ -1.97
UBR1-211ENST00000569971 SPIN3Q5JUX0 258 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 C9orf135Q5VTT2 229 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 RPL7L1Q6DKI1 246 aaKnown RBP2.73□□□□□ -1.97
UBR1-211ENST00000569971 FBXW12Q6X9E4 464 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 MOB1BQ7L9L4 216 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 CALHM1Q8IU99 346 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 ZNF695Q8IW36 515 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 Q8IYB0 196 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 CMTM1Q8IZ96 169 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 COMMD1Q8N668 190 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TPRX1Q8N7U7 411 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 UBAC2Q8NBM4 344 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 MDS2Q8NDY4 140 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 OR1S2Q8NGQ3 325 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 LHFPL5Q8TAF8 219 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 ABHD14BQ96IU4 210 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 SMIM8Q96KF7 97 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 MICU1Q9BPX6 476 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 PAXXQ9BUH6 204 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 C19orf24Q9BVV8 132 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 RTL8AQ9BWD3 113 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 SLC25A31Q9H0C2 315 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TMEM9BQ9NQ34 198 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 PARP11Q9NR21 331 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 SLC2A9Q9NRM0 540 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 CYTL1Q9NRR1 136 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 GLRX2Q9NS18 164 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 TMEM100Q9NV29 134 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 LSM5Q9Y4Y9 91 aaKnown RBP2.73□□□□□ -1.97
UBR1-211ENST00000569971 RAI1Q7Z5J4 1906 aaPredicted RBP2.73□□□□□ -1.97
UBR1-211ENST00000569971 RP1P56715 2156 aa2.73□□□□□ -1.97
UBR1-211ENST00000569971 KIAA1549Q9HCM3 1950 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 TRBV6-6A0A0A6YYG2 114 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 XIRP2A4UGR9 3374 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 RNASEK-C17orf49H0YIS7 233 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 H7C2Y5 167 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 J3QT63 122 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 WRBO00258 174 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 CEP290O15078 2479 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 DEGS1O15121 323 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SS18L1O75177 396 aaPredicted RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 TMEM50AO95807 157 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 NAPSAO96009 420 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 PRH1P02810 166 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SERPINE2P07093 398 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SEC11BP0C7V7 166 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 ZNF806P0C7X5 589 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 CCL2P13500 99 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 PRKACAP17612 351 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 CD82P27701 267 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 GNRHRP30968 328 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 NPBWR2P48146 333 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SULT1A2P50226 295 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 CAV2P51636 162 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 RAB2AP61019 212 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 ZNF266Q14584 549 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 PEA15Q15121 130 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 GABRA6Q16445 453 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 ALKBH6Q3KRA9 238 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SP6Q3SY56 376 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 HES3Q5TGS1 186 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 FBXW9Q5XUX1 488 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 HAGHLQ6PII5 290 aaPredicted RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 LYZL2Q7Z4W2 148 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 PPP1R27Q86WC6 154 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 SLC35G3Q8N808 338 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 ZFP62Q8NB50 900 aaPredicted RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 SUMF2Q8NBJ7 301 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 OR4A4PQ8NGN8 299 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 OR10J5Q8NHC4 309 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 RNASE11Q8TAA1 199 aaKnown RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 GLYATL2Q8WU03 294 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 CHCHD10Q8WYQ3 142 aaPredicted RBP2.72□□□□□ -1.97
UBR1-211ENST00000569971 OR5P3Q8WZ94 311 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 IL22RA2Q969J5 263 aa2.72□□□□□ -1.97
UBR1-211ENST00000569971 GNPNAT1Q96EK6 184 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms