RNA–Protein interactions for RNA: ENST00000565871.1

KIFC3-225, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-225	ENST00000565871	TMEM65	Q6PI78	240 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	ZNF546	Q86UE3	836 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	C5orf56	Q8N8D9	126 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	DTD1	Q8TEA8	209 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	SSMEM1	Q8WWF3	244 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	SMIM8	Q96KF7	97 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	CIB3	Q96Q77	187 aa	Predicted RBP	11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	HINT2	Q9BX68	163 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	PLEKHA3	Q9HB20	300 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	NDUFA4L2	Q9NRX3	87 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	CDC42EP3	Q9UKI2	254 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	HIVEP2	P31629	2446 aa		11.99	□□□□□ -0.49
KIFC3-225	ENST00000565871	ATR	Q13535	2644 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871		A0A1W2PN81	502 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871		M0QZK8	103 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	CNIH1	O95406	144 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	HLA-DRB1	P01911	266 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	CHRNA7	P36544	502 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	NUP62	P37198	522 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	VDAC2	P45880	294 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	P2RY1	P47900	373 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	COMP	P49747	757 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	EIF2B2	P49770	351 aa	Known RBP	11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	PAX9	P55771	341 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	TAS2R30	P59541	319 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	GNB1	P62873	340 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	C10orf55	Q5SWW7	151 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	RBMS3	Q6XE24	437 aa	Known RBP	11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	PRIMA1	Q86XR5	153 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	HIPK2	Q9H2X6	1198 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	PSENEN	Q9NZ42	101 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	VPREB3	Q9UKI3	123 aa		11.98	□□□□□ -0.49
KIFC3-225	ENST00000565871	HOXA3	O43365	443 aa	Predicted RBP	11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	SRD5A1	P18405	259 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	FXYD3	Q14802	87 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	ZNF562	Q6V9R5	426 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	MRPL41	Q8IXM3	137 aa	Known RBP	11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	TMEM86B	Q8N661	226 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	GRPEL2	Q8TAA5	225 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	SRSF12	Q8WXF0	261 aa	Known RBP	11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	HEYL	Q9NQ87	328 aa	Predicted RBP	11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	TNFSF18	Q9UNG2	199 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	WSB1	Q9Y6I7	421 aa		11.97	□□□□□ -0.49
KIFC3-225	ENST00000565871	FAM24A	A6NFZ4	105 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	CGB1	A6NKQ9	187 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871		E7EUB6	86 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	INS-IGF2	F8WCM5	200 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	ARPC5	O15511	151 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	TSC22D2	O75157	780 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	RPP30	P78346	268 aa	Known RBP	11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	CX3CL1	P78423	397 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	SSBP2	P81877	361 aa	Predicted RBP	11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	ERH	P84090	104 aa	Known RBP	11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	OR2C3	Q8N628	320 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	SRSF8	Q9BRL6	282 aa	Known RBP	11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	SLC25A31	Q9H0C2	315 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	TNFRSF19	Q9NS68	423 aa		11.96	□□□□□ -0.49
KIFC3-225	ENST00000565871	TLN2	Q9Y4G6	2542 aa		11.96	□□□□□ -0.5
KIFC3-225	ENST00000565871	IGHV7-81	A0A0B4J1V7	117 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	TMEM50A	O95807	157 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	AMY1A	P04745	511 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	RPL12	P30050	165 aa	Known RBP	11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	CAV2	P51636	162 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	NKX2-5	P52952	324 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	SPANXN5	Q5MJ07	72 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	ACOT7L	Q6ZUV0	252 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	ARPC1A	Q92747	370 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	AQP10	Q96PS8	301 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	MFF	Q9GZY8	342 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	LYRM2	Q9NU23	88 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	STRAP	Q9Y3F4	350 aa	Known RBP	11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871		U3KQ87	197 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871	VPS13C	Q709C8	3753 aa		11.95	□□□□□ -0.5
KIFC3-225	ENST00000565871		A0A1B0GW64	132 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	MSGN1	A6NI15	193 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	HKR1	P10072	659 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	OR2F1	Q13607	317 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	TMEM252	Q8N6L7	170 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	OR10W1	Q8NGF6	305 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	ABHD5	Q8WTS1	349 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	ZC4H2	Q9NQZ6	224 aa		11.94	□□□□□ -0.5
KIFC3-225	ENST00000565871	TNC	P24821	2201 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871		A0A0D9SG52	128 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	RNF222	A6NCQ9	220 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	SH2D7	A6NKC9	451 aa	Predicted RBP	11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	TEX22	C9J3V5	150 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	INAFM1	C9JVW0	142 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871		H3BP45	60 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	KCNAB3	O43448	404 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	IFNA10	P01566	189 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	OR13C7	P0DN81	318 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	CXCL2	P19875	107 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	HTR2B	P41595	481 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	ATP5I	P56385	69 aa	Predicted RBP	11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	ZNF345	Q14585	488 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	C9orf152	Q5JTZ5	239 aa		11.93	□□□□□ -0.5
KIFC3-225	ENST00000565871	SLC24A4	Q8NFF2	622 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms