RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ACOT6Q3I5F7 207 aaPredicted RBP15.45■□□□□ 0.06
SMPD3-203ENST00000563226 C10orf55Q5SWW7 151 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 FAM90A2PQ658T7 463 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 TMEM167AQ8TBQ9 72 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 PCGF1Q9BSM1 259 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 FKBP11Q9NYL4 201 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 MIOXQ9UGB7 285 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 OPRK1P41145 380 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 MOB3BQ86TA1 216 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 UNKLQ9H9P5 680 aaKnown RBP15.45■□□□□ 0.06
SMPD3-203ENST00000563226 PATZ1Q9HBE1 687 aaKnown RBP15.45■□□□□ 0.06
SMPD3-203ENST00000563226 NPVFQ9HCQ7 196 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 NDUFA4L2Q9NRX3 87 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 VAX2Q9UIW0 290 aa15.45■□□□□ 0.06
SMPD3-203ENST00000563226 PLXNB1O43157 2135 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 CGB1A6NKQ9 187 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 COLCA2A8K830 154 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 IL3RAP26951 378 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 CDKN1AP38936 164 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 CDC34P49427 236 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 BSXQ3C1V8 233 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 SSMEM1Q8WWF3 244 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 NEU4Q8WWR8 484 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 RAB1CQ92928 201 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 ISOC2Q96AB3 205 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 CLEC7AQ9BXN2 247 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 COMMD5Q9GZQ3 224 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 ONECUT1Q9UBC0 465 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 PXMP4Q9Y6I8 212 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 ENSAO43768 121 aaKnown RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 SLC25A17O43808 307 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 RNASE2P10153 161 aaKnown RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 USF1P22415 310 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 RAB13P51153 203 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 RHEBQ15382 184 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 LY6G5BQ8NDX9 201 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 TNFRSF14Q92956 283 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 TIMD4Q96H15 378 aa15.44■□□□□ 0.06
SMPD3-203ENST00000563226 ZNF430Q9H8G1 570 aaPredicted RBP15.44■□□□□ 0.06
SMPD3-203ENST00000563226 A0A1W2PPE2 198 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 SEC14L6B5MCN3 397 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 CYB5BO43169 146 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 NDUFS7O75251 213 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 IFNA1P01562 189 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 CD81P60033 236 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 PMS2P11Q13670 270 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 MRGPRG-AS1Q2M3A8 158 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 IQCF2Q8IXL9 164 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 OR1L8Q8NGR8 309 aa15.43■□□□□ 0.06
SMPD3-203ENST00000563226 NAV3Q8IVL0 2385 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 A0A1W2PPH5 198 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 BUB1B-PAK6H3BSN5 160 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 PRRX1P54821 245 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 OR4P4Q8NGL7 312 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 RBP4P02753 201 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 IGFBP2P18065 325 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 CNTFRP26992 372 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 MC5RP33032 325 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 MLANAQ16655 118 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 C2orf83Q53S99 150 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 TEPPQ6URK8 271 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 OR4A5Q8NH83 315 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 VSTM2AQ8TAG5 236 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 UBTD1Q9HAC8 227 aa15.42■□□□□ 0.06
SMPD3-203ENST00000563226 LIPFP07098 398 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 LDLRAD2Q5SZI1 272 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 PNKDQ8N490 385 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 BEND2Q8NDZ0 799 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 NIPSNAP3BQ9BS92 247 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 CHODLQ9H9P2 273 aa15.41■□□□□ 0.06
SMPD3-203ENST00000563226 IGHV1-3A0A0C4DH29 117 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 MEF2BQ02080 365 aaPredicted RBP15.4■□□□□ 0.06
SMPD3-203ENST00000563226 WT1-ASQ06250 92 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 RBMS3Q6XE24 437 aaKnown RBP15.4■□□□□ 0.06
SMPD3-203ENST00000563226 P2RX4Q99571 388 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 SIRT7Q9NRC8 400 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 CFAP46Q8IYW2 2715 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 B2MP61769 119 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 ARF6P62330 175 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 VMA21Q3ZAQ7 101 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 STPG3Q8N7X2 389 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 TVP23CQ96ET8 276 aa15.4■□□□□ 0.06
SMPD3-203ENST00000563226 IGKV1OR2-108A0A075B7D4 117 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 C15orf54Q8N8G6 183 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 HIST1H2BAQ96A08 127 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 INSIG2Q9Y5U4 225 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PPV4 95 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 ZNF727A8MUV8 499 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 CRYBA1P05813 215 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 PAX6P26367 422 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 PSMB3P49720 205 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 SLC35E3Q7Z769 313 aa15.39■□□□□ 0.05
SMPD3-203ENST00000563226 SSBP3Q9BWW4 388 aaPredicted RBP15.39■□□□□ 0.05
SMPD3-203ENST00000563226 FNDC10F2Z333 226 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 LY6LH3BQJ8 138 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 SOX15O60248 233 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 PAGE4O60829 102 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 AGAP20933 346 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 TAGLN2P37802 199 aaKnown RBP15.38■□□□□ 0.05
SMPD3-203ENST00000563226 LGALS7P47929 136 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms