RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DOCK6Q96HP0 2047 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 SH2D7A6NKC9 451 aaPredicted RBP7.78□□□□□ -1.16
CDH1-205ENST00000562836 PIN1P1O15428 100 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 GYPAP02724 150 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 KIR2DS2P43631 304 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 ZNF816Q0VGE8 651 aaPredicted RBP7.78□□□□□ -1.16
CDH1-205ENST00000562836 CDSNQ15517 529 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 HSD11B1LQ7Z5J1 315 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 CLECL1Q8IZS7 167 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 OR1L1Q8NH94 360 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 GLIPR2Q9H4G4 154 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
CDH1-205ENST00000562836 TMEM50BP56557 158 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.16
CDH1-205ENST00000562836 NOXRED1Q6NXP6 359 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 OR13H1Q8NG92 308 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 CLEC4CQ8WTT0 213 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 GTSF1Q8WW33 167 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 C5orf66Q9H5L9 145 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 PRORYQ9H606 182 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 NUDT4Q9NZJ9 180 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 PROCRQ9UNN8 238 aa7.77□□□□□ -1.16
CDH1-205ENST00000562836 NYNRINQ9P2P1 1898 aaKnown RBP7.77□□□□□ -1.17
CDH1-205ENST00000562836 LCTP09848 1927 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 KIF26AQ9ULI4 1882 aaPredicted RBP7.77□□□□□ -1.17
CDH1-205ENST00000562836 A0A087WV48 116 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 J3QRE1 110 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 H2BFMP0C1H6 154 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 MAGEA5P43359 124 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 SSR4P51571 173 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 SSBP1Q04837 148 aaKnown RBP7.77□□□□□ -1.17
CDH1-205ENST00000562836 AGERQ15109 404 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 KLF17Q5JT82 389 aaPredicted RBP7.77□□□□□ -1.17
CDH1-205ENST00000562836 LYRM7Q5U5X0 104 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 STAC2Q6ZMT1 411 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 ZNF584Q8IVC4 421 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 OR2A1Q8NGT9 310 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 PDCD1LG2Q9BQ51 273 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
CDH1-205ENST00000562836 WISP3O95389 354 aaPredicted RBP7.76□□□□□ -1.17
CDH1-205ENST00000562836 RPS11P62280 158 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDH1-205ENST00000562836 KLRB1Q12918 225 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 KHDC1LQ5JSQ8 128 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 ZCCHC24Q8N2G6 241 aaKnown RBP7.76□□□□□ -1.17
CDH1-205ENST00000562836 ABHD12Q8N2K0 398 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 OTOSQ8NHW6 89 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
CDH1-205ENST00000562836 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 RABAC1Q9UI14 185 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 DOCK4Q8N1I0 1966 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 FNDC1Q4ZHG4 1894 aaPredicted RBP7.76□□□□□ -1.17
CDH1-205ENST00000562836 HSPB3Q12988 150 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 GUSBP1Q15486 140 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 DMRTC1Q5HYR2 192 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 PEAR1Q5VY43 1037 aaPredicted RBP7.76□□□□□ -1.17
CDH1-205ENST00000562836 TMEM136Q6ZRR5 245 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 DEFB132Q7Z7B7 95 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 PRRG4Q9BZD6 226 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 LOC285556D6RIA3 1793 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 VWA8A3KMH1 1905 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 WNT10BO00744 389 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 STC2O76061 302 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 PI3P19957 117 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 CNTFRP26992 372 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 CTGFP29279 349 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 ZNF627Q7L945 461 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 PRSS41Q7RTY9 318 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 DEFB106AQ8N104 65 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 C20orf173Q96LM9 149 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 RPRMQ9NS64 109 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 CES1P1Q9UKY3 287 aa7.76□□□□□ -1.17
CDH1-205ENST00000562836 A0A0G2JMZ2 1700 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 LRRC37A2A6NM11 1700 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 C2orf70A6NJV1 201 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 RIIAD1A6NNX1 92 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 SNURFLB1AK76 121 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 NKX2-2O95096 273 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 TAS2R45P59539 299 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 RPL31P62899 125 aaKnown RBP7.75□□□□□ -1.17
CDH1-205ENST00000562836 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 PBOV1Q9GZY1 135 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 TP53TG1Q9Y2A0 90 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 FRMD6-AS1P0C7T7 363 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 CECR9P0C854 216 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 COX8AP10176 69 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 PTGDSP41222 190 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 SLC35E4Q6ICL7 350 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 Q6Q795 121 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 DLX4Q92988 240 aaPredicted RBP7.75□□□□□ -1.17
CDH1-205ENST00000562836 TMEM70Q9BUB7 260 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 PEMTQ9UBM1 199 aa7.75□□□□□ -1.17
CDH1-205ENST00000562836 GOLGA4Q13439 2230 aaKnown RBP7.75□□□□□ -1.17
CDH1-205ENST00000562836 TRAV1-1A0A0B4J248 108 aa7.74□□□□□ -1.17
CDH1-205ENST00000562836 ELANEP08246 267 aa7.74□□□□□ -1.17
CDH1-205ENST00000562836 FBXL22Q6P050 247 aa7.74□□□□□ -1.17
CDH1-205ENST00000562836 FAM231DQ6ZW35 169 aa7.74□□□□□ -1.17
CDH1-205ENST00000562836 OR2T6Q8NHC8 308 aa7.74□□□□□ -1.17
CDH1-205ENST00000562836 APOBEC4Q8WW27 367 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms