RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
SPG7-203ENST00000561702 PPIAL4EA0A075B759 164 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 TRAV38-1A0A0B4J264 116 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 IGHV1-69-2A0A0G2JMI3 117 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 PPIAL4DF5H284 164 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 RRHO14718 337 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 PPIAL4FP0DN26 164 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 RTL8BQ17RB0 113 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
SPG7-203ENST00000561702 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
SPG7-203ENST00000561702 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 GAL3ST2Q9H3Q3 398 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
SPG7-203ENST00000561702 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 CFAP46Q8IYW2 2715 aa11.73□□□□□ -0.53
SPG7-203ENST00000561702 H7BYZ3 331 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 CLN5O75503 358 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 CXorf1O96002 111 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 TRGC2P03986 189 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 SOD3P08294 240 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 RNF224P0DH78 156 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 NPY1RP25929 384 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 S100A2P29034 98 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 NDUFA6P56556 154 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 RPS16P62249 146 aaKnown RBP11.72□□□□□ -0.53
SPG7-203ENST00000561702 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 VKORC1L1Q8N0U8 176 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 SRD5A3Q9H8P0 318 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 RALYQ9UKM9 306 aaKnown RBP11.72□□□□□ -0.53
SPG7-203ENST00000561702 LSM4Q9Y4Z0 139 aaKnown RBP11.72□□□□□ -0.53
SPG7-203ENST00000561702 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
SPG7-203ENST00000561702 CD99P14209 185 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 ZNF383Q8NA42 475 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 GGTLC1Q9BX51 225 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 GAR1Q9NY12 217 aaKnown RBP11.72□□□□□ -0.53
SPG7-203ENST00000561702 PXMP4Q9Y6I8 212 aa11.72□□□□□ -0.53
SPG7-203ENST00000561702 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 PPP1R2P9O14990 202 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 TMPRSS2O15393 492 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.53
SPG7-203ENST00000561702 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 COL8A2P25067 703 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 MGST2Q99735 147 aa11.71□□□□□ -0.53
SPG7-203ENST00000561702 MT-CO2P00403 227 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 IGHV3-7P01780 117 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
SPG7-203ENST00000561702 SRP14P37108 136 aaKnown RBP11.7□□□□□ -0.54
SPG7-203ENST00000561702 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
SPG7-203ENST00000561702 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 SLC16A13Q7RTY0 426 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 OR51M1Q9H341 326 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 FCN3O75636 299 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 YIF1AO95070 293 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 GALR1P47211 349 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 C1orf229Q6ZS94 237 aaPredicted RBP11.7□□□□□ -0.54
SPG7-203ENST00000561702 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 LEAP2Q969E1 77 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 OR51B2Q9Y5P1 312 aa11.7□□□□□ -0.54
SPG7-203ENST00000561702 TET2Q6N021 2002 aaPredicted RBP11.69□□□□□ -0.54
SPG7-203ENST00000561702 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 B2MP61769 119 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 RHOBP62745 196 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 CTAG1AP78358 180 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 KCNIP4Q6PIL6 250 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 OSR1Q8TAX0 266 aaPredicted RBP11.69□□□□□ -0.54
SPG7-203ENST00000561702 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 TMEM170AQ8WVE7 144 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 RAB1BQ9H0U4 201 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
SPG7-203ENST00000561702 SLC35D1Q9NTN3 355 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms