RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 OR1L8Q8NGR8 309 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 MUC7Q8TAX7 377 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.36
LRRC28-210ENST00000558879 CITED4Q96RK1 184 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 TECRQ9NZ01 308 aaKnown RBP12.83□□□□□ -0.36
LRRC28-210ENST00000558879 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 C15orf61A6NNL5 157 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 KRASP01116 189 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 TRAPPC2P0DI81 140 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 TRAPPC2BP0DI82 140 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 TSPAN5P62079 268 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 LPCAT3Q6P1A2 487 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 LINC00322Q6ZN03 302 aaPredicted RBP12.82□□□□□ -0.36
LRRC28-210ENST00000558879 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 AP3S1Q92572 193 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 TMEM14BQ9NUH8 114 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 THYN1Q9P016 225 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 NSG2Q9Y328 171 aa12.82□□□□□ -0.36
LRRC28-210ENST00000558879 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
LRRC28-210ENST00000558879 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 OR13C7P0DN81 318 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
LRRC28-210ENST00000558879 CBLN1P23435 193 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 GPR183P32249 361 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 MFAP2P55001 183 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 CD81P60033 236 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 HAGHQ16775 308 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 MZT2AQ6P582 158 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 LHFPL1Q86WI0 220 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 SLC38A6Q8IZM9 456 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 OR5B3Q8NH48 314 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 VN1R17PQ8TDU5 208 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 NEURL2Q9BR09 285 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 SPATA25Q9BR10 227 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 ZNF436Q9C0F3 470 aaPredicted RBP12.81□□□□□ -0.36
LRRC28-210ENST00000558879 EDA2RQ9HAV5 297 aa12.81□□□□□ -0.36
LRRC28-210ENST00000558879 DBX1A6NMT0 343 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 FAM25AB3EWG3 89 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 FAM25CB3EWG5 89 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 FAM25GB3EWG6 89 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 TPPPO94811 219 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 CLEC3BP05452 202 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 CD7P09564 240 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 GPR107Q5VW38 600 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 WDR89Q96FK6 387 aaPredicted RBP12.8□□□□□ -0.36
LRRC28-210ENST00000558879 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 MRPS26Q9BYN8 205 aaKnown RBP12.8□□□□□ -0.36
LRRC28-210ENST00000558879 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 KLK11Q9UBX7 282 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 MLXQ9UH92 298 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 OR51B2Q9Y5P1 312 aa12.8□□□□□ -0.36
LRRC28-210ENST00000558879 STARD9Q9P2P6 4700 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
LRRC28-210ENST00000558879 M0QYG6 137 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 CYB5BO43169 146 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 TGOLN2O43493 480 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 SNAPC5O75971 98 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 C8orf88P0DMB2 117 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 S100GP29377 79 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 RND3P61587 244 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 CASC10Q5T4H9 136 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 ARRDC1Q8N5I2 433 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 OR52I2Q8NH67 350 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 WFDC10AQ9H1F0 79 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 SLC2A8Q9NY64 477 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 EXTL2Q9UBQ6 330 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 MTFP1Q9UDX5 166 aa12.79□□□□□ -0.36
LRRC28-210ENST00000558879 K7EIM0 57 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 TBPP20226 339 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 ELLP55199 621 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-210ENST00000558879 RNASE12Q5GAN4 147 aaKnown RBP12.78□□□□□ -0.36
LRRC28-210ENST00000558879 TMEM190Q8WZ59 177 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-210ENST00000558879 ABHD1Q96SE0 405 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 MIXL1Q9H2W2 232 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 CEPT1Q9Y6K0 416 aa12.78□□□□□ -0.36
LRRC28-210ENST00000558879 LYSTQ99698 3801 aa12.77□□□□□ -0.36
LRRC28-210ENST00000558879 ZNF320A2RRD8 509 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 CD74P04233 296 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 CD3DP04234 171 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
LRRC28-210ENST00000558879 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-210ENST00000558879 PLET1Q6UQ28 207 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 BTNL8Q6UX41 500 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms