RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CRYGBP07316 175 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 SNCAP37840 140 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 CAMLGP49069 296 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 DLK1P80370 383 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 VWC2Q2TAL6 325 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 AKR1C8PQ5T2L2 129 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 HSD17B13Q7Z5P4 300 aaPredicted RBP11.09□□□□□ -0.63
TPM1-215ENST00000558868 THNSL2Q86YJ6 484 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
TPM1-215ENST00000558868 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
TPM1-215ENST00000558868 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
TPM1-215ENST00000558868 KIAA1456Q9P272 454 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 B4DSR2 109 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 SOX15O60248 233 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 GATA3P23771 443 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 SUB1P53999 127 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM1-215ENST00000558868 SERF2P84101 59 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 PRSS8Q16651 343 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 IL34Q6ZMJ4 242 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 TMEM182Q6ZP80 229 aaPredicted RBP11.08□□□□□ -0.64
TPM1-215ENST00000558868 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 CFHR4Q92496 578 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 NRGNQ92686 78 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 TAF15Q92804 592 aaKnown RBP eCLIP11.08□□□□□ -0.64
TPM1-215ENST00000558868 MARC2Q969Z3 335 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 SH3BGRL3Q9H299 93 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 METTL1Q9UBP6 276 aaKnown RBP11.08□□□□□ -0.64
TPM1-215ENST00000558868 SIGLEC9Q9Y336 463 aa11.08□□□□□ -0.64
TPM1-215ENST00000558868 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 A0A1W2PRD5 423 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 A0A1W2PRF3 423 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 A0A1W2PRM7 423 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 RAB19A4D1S5 217 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 RRHO14718 337 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 MPDU1O75352 247 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 TSPAN9O75954 239 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 CA2P00918 260 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 MSMBP08118 114 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 COL8A1P27658 744 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 BRS3P32247 399 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 RPL27AP46776 148 aaKnown RBP11.07□□□□□ -0.64
TPM1-215ENST00000558868 PLGLAQ15195 96 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 SSX2Q16385 188 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 AANATQ16613 207 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 DEFB113Q30KQ7 82 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 LDLRAD2Q5SZI1 272 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 Q6ZRG5 221 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 ZNF709Q8N972 641 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 NPBQ8NG41 125 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 RITA1Q96K30 269 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
TPM1-215ENST00000558868 NPFFO15130 113 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 NBR2O15453 112 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 OPN1MWP04001 364 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
TPM1-215ENST00000558868 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 MYOD1P15172 320 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 FGF7P21781 194 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 EBI3Q14213 229 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 HES1Q14469 280 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 BSXQ3C1V8 233 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 UQCC3Q6UW78 93 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
TPM1-215ENST00000558868 EAF1Q96JC9 268 aaPredicted RBP11.06□□□□□ -0.64
TPM1-215ENST00000558868 FAM210AQ96ND0 272 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 SRSF8Q9BRL6 282 aaKnown RBP11.06□□□□□ -0.64
TPM1-215ENST00000558868 REG4Q9BYZ8 158 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 PLA2G2EQ9NZK7 142 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 F8P00451 2351 aa11.06□□□□□ -0.64
TPM1-215ENST00000558868 ARHGAP32A7KAX9 2087 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 ANKRD34BA5PLL1 514 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 TEX46H3BTG2 121 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 NDUFA3O95167 84 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 MBP02144 154 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 COMPP49747 757 aaPredicted RBP11.05□□□□□ -0.64
TPM1-215ENST00000558868 RAB2AP61019 212 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 RUNX1Q01196 453 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 MMDQ15546 238 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 TNXAQ16473 311 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 LFNGQ8NES3 379 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 FAM213BQ8TBF2 198 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 MBD6Q96DN6 1003 aa11.05□□□□□ -0.64
TPM1-215ENST00000558868 HRH4Q9H3N8 390 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms