RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 UPK2O00526 184 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 RBP4P02753 201 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 SSX2Q16385 188 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 EIF4E3Q8N5X7 224 aaKnown RBP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 TAF15Q92804 592 aaKnown RBP eCLIP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 WDR61Q9GZS3 305 aaKnown RBP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 EIF5A2Q9GZV4 153 aaKnown RBP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM14BQ9NUH8 114 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 CRYBG3Q68DQ2 2970 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 C15orf62A8K5M9 175 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 BUB1B-PAK6H3BSN5 160 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 SLC25A17O43808 307 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 NPY1RP25929 384 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 SNCAP37840 140 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 RAB2AP61019 212 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 RPL8P62917 257 aaKnown RBP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 S100A12P80511 92 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 KLRD1Q13241 179 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 POU2AF1Q16633 256 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 LRRC75BQ2VPJ9 315 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM177Q53S58 311 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 ST6GALNAC6Q969X2 333 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 PCGF1Q9BSM1 259 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 BET1LQ9NYM9 111 aa6.71□□□□□ -1.34
RAB5B-210ENST00000553116 KLF2Q9Y5W3 355 aaPredicted RBP6.71□□□□□ -1.34
RAB5B-210ENST00000553116 ACTL6BO94805 426 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
RAB5B-210ENST00000553116 USF1P22415 310 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-210ENST00000553116 TLE4Q04727 773 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 BEND2Q8NDZ0 799 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 SSX3Q99909 188 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 HILPDAQ9Y5L2 63 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 CENPEQ02224 2701 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 MAP1AP78559 2803 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-210ENST00000553116 RRHO14718 337 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 YIF1AO95070 293 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 HTR1DP28221 377 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 PDLIM4P50479 330 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 ZNF137PP52743 207 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 PLGLAQ15195 96 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 BTNL8Q6UX41 500 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 OR4P4Q8NGL7 312 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 LPAR2Q9HBW0 351 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 NAV3Q8IVL0 2385 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 IGHV1-3A0A0C4DH29 117 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 M0R1W7 72 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 IGHV2-5P01817 119 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 IGHV4-39P01824 125 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 VDAC2P45880 294 aaPredicted RBP6.7□□□□□ -1.34
RAB5B-210ENST00000553116 ATP5J2P56134 94 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 LGALS4P56470 323 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 AARDQ4LEZ3 155 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 ARL6IP6Q8N6S5 226 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 LY6G5BQ8NDX9 201 aa6.7□□□□□ -1.34
RAB5B-210ENST00000553116 C1orf196B1AJZ1 125 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 CLN5O75503 358 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 ADCYAP1P18509 176 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 CD1BP29016 333 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 CEACAM3P40198 252 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 PRCDQ00LT1 54 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 Q8N7P7 452 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 OR1L8Q8NGR8 309 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 OR5B3Q8NH48 314 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
RAB5B-210ENST00000553116 PBDC1Q9BVG4 233 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 ZNF257Q9Y2Q1 563 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 TEX50A0A1B0GTY4 177 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 PMS2P5A8MQ11 134 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 C17orf112F2Z3M2 114 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 GOSR1O95249 250 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 CA2P00918 260 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 GNB1P62873 340 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 HES1Q14469 280 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 VMO1Q7Z5L0 202 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 LFNGQ8NES3 379 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 CLDND2Q8NHS1 167 aa6.69□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM218A2RU14 115 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 SNRPCP09234 159 aaKnown RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 COX6B1P14854 86 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 ZFP36P26651 326 aaKnown RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 ERHP84090 104 aaKnown RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 SERF2P84101 59 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 GUK1Q16774 197 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 FFAR4Q5NUL3 377 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 FAM168AQ92567 244 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PIMREGQ9BSJ6 248 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 DPM3Q9P2X0 92 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 RNASEK-C17orf49H0YIS7 233 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 OVOL3O00110 214 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 HBE1P02100 147 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PRTN3P24158 256 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PAX6P26367 422 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 LGALS7P47929 136 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 TNXAQ16473 311 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PDLIM3Q53GG5 364 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms