RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MRPL27Q9P0M9 148 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 MRPS14O60783 128 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 SCGNO76038 276 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 SERPINE2P07093 398 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 NQO2P16083 231 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 MSMO1Q15800 293 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 SLC25A24Q6NUK1 477 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 RBPMS2Q6ZRY4 209 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 LYG2Q86SG7 212 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 OR2C3Q8N628 320 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 GDPD1Q8N9F7 314 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 DMBX1Q8NFW5 382 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 FCAMRQ8WWV6 532 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 TMEM190Q8WZ59 177 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 COMMD5Q9GZQ3 224 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 PLEKHA2Q9HB19 425 aa8.55□□□□□ -1.04
PRPF40B-212ENST00000551111 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 K7EIM0 57 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 SPRY2O43597 315 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 RLN1P04808 185 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 TRAPPC2P0DI81 140 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 TRAPPC2BP0DI82 140 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 G6PCP35575 357 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 LPAR6P43657 344 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 ELLP55199 621 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 AADACL3Q5VUY0 350 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 OR5AP2Q8NGF4 316 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 SCARB1Q8WTV0 552 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 MARC2Q969Z3 335 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 HINT2Q9BX68 163 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
PRPF40B-212ENST00000551111 IGHV3-49A0A0A0MS15 119 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 ERICH4A6NGS2 130 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 TSPAN4O14817 238 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 PGLYRP1O75594 196 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 KRASP01116 189 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 IGHV3-48P01763 117 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 PMP2P02689 132 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 TNFRSF9Q07011 255 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 CATR1Q13166 79 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 RPP25LQ8N5L8 163 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 UBAC2Q8NBM4 344 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 OR5B3Q8NH48 314 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 VN1R17PQ8TDU5 208 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 FCGR1BQ92637 280 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 C20orf24Q9BUV8 137 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 FXYD6Q9H0Q3 95 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-212ENST00000551111 MARCH11A6NNE9 402 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 ATP6V1G2O95670 118 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 CTSGP08311 255 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 F2RP25116 425 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 NEDD8Q15843 81 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 CEMP1Q6PRD7 247 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 DHRS11Q6UWP2 260 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 Q6ZWC4 215 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 LYSMD2Q8IV50 215 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 OR1L8Q8NGR8 309 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 MOB3AQ96BX8 217 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 RNF183Q96D59 192 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 RNF2Q99496 336 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 SRSF8Q9BRL6 282 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 AIFM2Q9BRQ8 373 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 ZNF2Q9BSG1 426 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 DAZ1Q9NQZ3 744 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 DIABLOQ9NR28 239 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 C21orf62Q9NYP8 219 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 COMMD9Q9P000 198 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 ANAPC10Q9UM13 185 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 OR51B2Q9Y5P1 312 aa8.52□□□□□ -1.05
PRPF40B-212ENST00000551111 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 A0A0A6YYH2 397 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 A6NJ64 397 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 NDUFA4O00483 81 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 XRCC3O43542 346 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 DEDDO75618 318 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 IGKV1-39P01597 117 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 IGKV1D-39P04432 117 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 BMI1P35226 326 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 RPS19P39019 145 aaKnown RBP8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 SCAND1P57086 179 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 HERV-K104P61576 105 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 SLC38A6Q8IZM9 456 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms