RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 OR4D10Q8NGI6 311 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
SSH1-208ENST00000548522 SNAPC3Q92966 411 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 ARHGAP5-AS1Q96IT6 56 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 OR2A7Q96R45 310 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
SSH1-208ENST00000548522 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
SSH1-208ENST00000548522 SDHAF2Q9NX18 166 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 ZNF230Q9UIE0 474 aaPredicted RBP12.43□□□□□ -0.42
SSH1-208ENST00000548522 FLVCR2Q9UPI3 526 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 KCNK7Q9Y2U2 307 aa12.43□□□□□ -0.42
SSH1-208ENST00000548522 ZNF785A8K8V0 405 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 FCER2P06734 321 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 LGALS7P47929 136 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 TAS2R31P59538 309 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 FAAP20Q6NZ36 180 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 OR13C8Q8NGS7 320 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 NUDCD2Q8WVJ2 157 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 PECRQ9BY49 303 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
SSH1-208ENST00000548522 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 FABP7O15540 132 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 ANXA7P20073 488 aaKnown RBP12.41□□□□□ -0.42
SSH1-208ENST00000548522 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
SSH1-208ENST00000548522 RHOGP84095 191 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 DHODHQ02127 395 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 EXOSC2Q13868 293 aaKnown RBP12.41□□□□□ -0.42
SSH1-208ENST00000548522 SURF2Q15527 256 aaPredicted RBP12.41□□□□□ -0.42
SSH1-208ENST00000548522 IGSF11Q5DX21 431 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 SLC25A42Q86VD7 318 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 TMEM17Q86X19 198 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 USMG5Q96IX5 58 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 PHB2Q99623 299 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 SRD5A3Q9H8P0 318 aa12.41□□□□□ -0.42
SSH1-208ENST00000548522 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 BET1O15155 118 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 SHOXO15266 292 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 GSTT2P0CG29 244 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 HLA-GP17693 338 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 CXCL3P19876 107 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 C4BPBP20851 252 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 IFITM2Q01629 132 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 TNXAQ16473 311 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 C19orf35Q6ZS72 473 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
SSH1-208ENST00000548522 IL17DQ8TAD2 202 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 CMSS1Q9BQ75 279 aaKnown RBP12.4□□□□□ -0.42
SSH1-208ENST00000548522 PEMTQ9UBM1 199 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 MGAT4AQ9UM21 535 aa12.4□□□□□ -0.42
SSH1-208ENST00000548522 PPP5D1E7EU14 171 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 M0QYG6 137 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
SSH1-208ENST00000548522 RLN1P04808 185 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 OR4E1P0C645 316 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 HRH1P35367 487 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 ARFRP1Q13795 201 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 PRSS8Q16651 343 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 TMEM177Q53S58 311 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 LHFPL1Q86WI0 220 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 BEST4Q8NFU0 473 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 OR2K2Q8NGT1 345 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
SSH1-208ENST00000548522 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 LINC00476Q8WZB0 136 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 WDR89Q96FK6 387 aaPredicted RBP12.39□□□□□ -0.43
SSH1-208ENST00000548522 SEC22CQ9BRL7 303 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 MGAT4CQ9UBM8 478 aa12.39□□□□□ -0.43
SSH1-208ENST00000548522 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
SSH1-208ENST00000548522 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 OR11H12B2RN74 326 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
SSH1-208ENST00000548522 GUCA2BQ16661 112 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 Q6ZS49 121 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 OR5H2Q8NGV7 314 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 TERB2Q8NHR7 220 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
SSH1-208ENST00000548522 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 MPPED1O15442 326 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 CRYZL1O95825 349 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 UBE2KP61086 200 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 LYG2Q86SG7 212 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 GVQW1Q8N7I0 195 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 DDB2Q92466 427 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
SSH1-208ENST00000548522 HECTD4Q9Y4D8 3996 aa12.36□□□□□ -0.43
SSH1-208ENST00000548522 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
SSH1-208ENST00000548522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms