RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 RAB5CP51148 216 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 UBE2E1P51965 193 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SUB1P53999 127 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 RAB2AP61019 212 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 LMO4P61968 165 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 RPL8P62917 257 aaKnown RBP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 PRCDQ00LT1 54 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SRSF1Q07955 248 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 FOXL1Q12952 345 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 DEFB113Q30KQ7 82 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 CLLU1Q5K131 121 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SPANXN5Q5MJ07 72 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 HSD17B13Q7Z5P4 300 aaPredicted RBP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 PDZD9Q8IXQ8 264 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 MMD2Q8IY49 270 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 PUSL1Q8N0Z8 303 aaKnown RBP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 Q8N7P7 452 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 OR10P1Q8NGE3 313 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM167AQ8TBQ9 72 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SCGB1C1Q8TD33 95 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 ST6GALNAC6Q969X2 333 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM147Q9BVK8 224 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 SIRPDQ9H106 197 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 RBKSQ9H477 322 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM14BQ9NUH8 114 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 AURKAIP1Q9NWT8 199 aaPredicted RBP4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 C1RLQ9NZP8 487 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 OR51B2Q9Y5P1 312 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 COL6A6A6NMZ7 2263 aa4.04□□□□□ -1.76
AC078880.2-201ENST00000547948 ZNF462Q96JM2 2506 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 RAI1Q7Z5J4 1906 aaPredicted RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 COL12A1Q99715 3063 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IGHV4-30-2A0A087WSY4 118 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IGHV4-61A0A0C4DH41 118 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IGSF23A1L1A6 192 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 FAM24AA6NFZ4 105 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 PRSS47A8MTI9 375 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 UMAD1C9J7I0 102 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 C17orf112F2Z3M2 114 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 CORTO00230 105 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 UPK2O00526 184 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 TIMM23O14925 209 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 MPDU1O75352 247 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 PROP1O75360 226 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 MOSP00540 346 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IFNA10P01566 189 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IGKV1-16P04430 117 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 OR9G9P0C7N8 305 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 SEC11BP0C7V7 166 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 FAM106CPP0CH98 169 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 NPY1RP25929 384 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 SNCAP37840 140 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 COMPP49747 757 aaPredicted RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 DYNLT3P51808 116 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 BPIFB3P59826 476 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 HSPE1P61604 102 aaKnown RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 ERHP84090 104 aaKnown RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 IFITM2Q01629 132 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 SLC38A11Q08AI6 406 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM267Q0VDI3 215 aaPredicted RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 HES1Q14469 280 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 CLINT1Q14677 625 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 MMDQ15546 238 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 Q5PR19 223 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 PRSS57Q6UWY2 283 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 ALKAL2Q6UX46 152 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 C11orf42Q8N5U0 333 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 TMEM217Q8N7C4 229 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 ZNF709Q8N972 641 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 OR5C1Q8NGR4 320 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 OR1L8Q8NGR8 309 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 OR2T10Q8NGZ9 312 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 C22orf15Q8WYQ4 148 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 MALSU1Q96EH3 234 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 SRSF8Q9BRL6 282 aaKnown RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 GGACTQ9BVM4 153 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 QTRT1Q9BXR0 403 aaKnown RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 PARD6GQ9BYG4 376 aaPredicted RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 SMIM3Q9BZL3 60 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 UQCC1Q9NVA1 299 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 ZNRD1Q9P1U0 126 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 METTL1Q9UBP6 276 aaKnown RBP4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 TCF19Q9Y242 345 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 FBXO7Q9Y3I1 522 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 AUP1Q9Y679 476 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 ESPL1Q14674 2120 aa4.03□□□□□ -1.76
AC078880.2-201ENST00000547948 DYSFO75923 2080 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 EPG5Q9HCE0 2579 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 TRAV40A0A0B4J280 105 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 UBE2L5PA0A1B0GUS4 154 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 RPS10-NUDT3A0A1W2PQS6 291 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 FNDC10F2Z333 226 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 INS-IGF2F8WCM5 200 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 RNASEK-C17orf49H0YIS7 233 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 TRIM77I1YAP6 450 aa4.02□□□□□ -1.77
AC078880.2-201ENST00000547948 NPFFO15130 113 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms