RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 C15orf61A6NNL5 157 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 K7EIL1 84 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 IGHV3-23P01764 117 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 CTSDP07339 412 aaPredicted RBP9.08□□□□□ -0.96
RAB5C-204ENST00000547517 PTBP1P26599 531 aaKnown RBP eCLIP9.08□□□□□ -0.966e-22■■■■■ 138.4
RAB5C-204ENST00000547517 ECI1P42126 302 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 AKR1C2P52895 323 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 ZNF79Q15937 498 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 H2BFWTQ7Z2G1 175 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 OR51S1Q8NGJ8 323 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 SEC22AQ96IW7 307 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 PRRT1Q99946 306 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 SRSF8Q9BRL6 282 aaKnown RBP9.08□□□□□ -0.96
RAB5C-204ENST00000547517 MCUBQ9NWR8 336 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 ZMAT5Q9UDW3 170 aaKnown RBP9.08□□□□□ -0.96
RAB5C-204ENST00000547517 PRNDQ9UKY0 176 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 S4R3C0 116 aa9.08□□□□□ -0.96
RAB5C-204ENST00000547517 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 TEX50A0A1B0GTY4 177 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 DBX1A6NMT0 343 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 NDUFB8O95169 186 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 TRAPPC2P0DI81 140 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 TRAPPC2BP0DI82 140 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 OR13C7P0DN81 318 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 INSL3P51460 131 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 MECP2P51608 486 aaKnown RBP9.07□□□□□ -0.96
RAB5C-204ENST00000547517 SYNJ2BPP57105 145 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 RPEL1Q2QD12 228 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 SP6Q3SY56 376 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 THOC7Q6I9Y2 204 aaKnown RBP9.07□□□□□ -0.96
RAB5C-204ENST00000547517 ZNF429Q86V71 674 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 OR4A16Q8NH70 328 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 LSM10Q969L4 123 aaKnown RBP9.07□□□□□ -0.96
RAB5C-204ENST00000547517 TRIM63Q969Q1 353 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 FANCD2OSQ96PS1 177 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 PRR25Q96S07 402 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 THAP7Q9BT49 309 aaPredicted RBP9.07□□□□□ -0.96
RAB5C-204ENST00000547517 C5orf66Q9H5L9 145 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 TMEM14BQ9NUH8 114 aa9.07□□□□□ -0.96
RAB5C-204ENST00000547517 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 TEX13DA0A0J9YY54 714 aaPredicted RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 MFSD2BA6NFX1 497 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 PPP5D1E7EU14 171 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 BMPR1BO00238 502 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 LY86O95711 162 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 OR5AC1P0C628 307 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 WT1-ASQ06250 92 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 SURF2Q15527 256 aaPredicted RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 IZUMO4Q1ZYL8 232 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 ACSM6Q6P461 480 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 HSD17B13Q7Z5P4 300 aaPredicted RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 CCDC190Q86UF4 302 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 HAPLN4Q86UW8 402 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 CADM3Q8N126 398 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 Q8N402 240 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 GDPD1Q8N9F7 314 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 RNASE11Q8TAA1 199 aaKnown RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 OR4C12Q96R67 309 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 RTBDNQ9BSG5 229 aaPredicted RBP9.06□□□□□ -0.96
RAB5C-204ENST00000547517 ELOVL1Q9BW60 279 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 SLC2A8Q9NY64 477 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 SCP2D1Q9UJQ7 156 aa9.06□□□□□ -0.96
RAB5C-204ENST00000547517 IGKV1-5P01602 117 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 UCP1P25874 307 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 FAUP35544 74 aaKnown RBP9.05□□□□□ -0.96
RAB5C-204ENST00000547517 AP3S2P59780 193 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 KLF9Q13886 244 aaPredicted RBP9.05□□□□□ -0.96
RAB5C-204ENST00000547517 KLF5Q13887 457 aaPredicted RBP9.05□□□□□ -0.96
RAB5C-204ENST00000547517 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 SPANXN2Q5MJ10 180 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 TOMM5Q8N4H5 51 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 PPP1R14BQ96C90 147 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 TMEM56Q96MV1 263 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 NAA60Q9H7X0 242 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 ZNF256Q9Y2P7 627 aaPredicted RBP9.05□□□□□ -0.96
RAB5C-204ENST00000547517 DMRT1Q9Y5R6 373 aa9.05□□□□□ -0.96
RAB5C-204ENST00000547517 CRYM-AS1A6NIL9 109 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 CYB5BO43169 146 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 B3GALNT1O75752 331 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 ATG12O94817 140 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 HLA-AP01891 365 aaKnown RBP9.04□□□□□ -0.96
RAB5C-204ENST00000547517 DCTN2Q13561 401 aaKnown RBP9.04□□□□□ -0.96
RAB5C-204ENST00000547517 KLK9Q2XQG4 91 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 SPINK9Q5DT21 86 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 FAM209BQ5JX69 171 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 OR6Q1Q8NGQ2 317 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 CXorf58Q96LI9 332 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 SRRQ9GZT4 340 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 TMEM222Q9H0R3 208 aa9.04□□□□□ -0.96
RAB5C-204ENST00000547517 ZC4H2Q9NQZ6 224 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms