RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 APRG1Q8IVJ8 170 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 GDPD1Q8N9F7 314 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 ZBTB34Q8NCN2 500 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 OR10W1Q8NGF6 305 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 ATP6V0BQ99437 205 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 QTRT1Q9BXR0 403 aaKnown RBP14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 FAT2Q9NYQ8 4349 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 TRDV1A0A1B0GX56 115 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 MPTX1A8MV57 137 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 HPRT1P00492 218 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 NQO2P16083 231 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 TCTAP57738 103 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 GNG2P59768 71 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 RBMS2Q15434 407 aaKnown RBP14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 SLC25A24Q6NUK1 477 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 ZNF773Q6PK81 442 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 CD300LFQ8TDQ1 290 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 SECTM1Q8WVN6 248 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 CHRDL1Q9BU40 450 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 C20orf24Q9BUV8 137 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 C11orf68Q9H3H3 251 aaKnown RBP14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 FBXL17Q9UF56 701 aa14.65□□□□□ -0.06
LPCAT3-210ENST00000540090 DNAH2Q9P225 4427 aa14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 SULT1C2O00338 296 aa14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 SERPINE2P07093 398 aa14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 CMC4P56277 68 aaPredicted RBP14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 THOC7Q6I9Y2 204 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 HSD17B13Q7Z5P4 300 aaPredicted RBP14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 C2CD4CQ8TF44 421 aa14.64□□□□□ -0.07
LPCAT3-210ENST00000540090 C15orf62A8K5M9 175 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 F8W735 103 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 ZNF207O43670 478 aaKnown RBP14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 TRAPPC2P0DI81 140 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 TRAPPC2BP0DI82 140 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 OR13C7P0DN81 318 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 FCGR2CP31995 323 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 ADMP35318 185 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 WT1-ASQ06250 92 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 ZNF124Q15973 351 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 OR13F1Q8NGS4 319 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 OR11H2Q8NH07 326 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 SCARB1Q8WTV0 552 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 TMEM140Q9NV12 185 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 NDUFB11Q9NX14 153 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 C21orf62Q9NYP8 219 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 SMPXQ9UHP9 88 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 ETV7Q9Y603 341 aa14.63□□□□□ -0.07
LPCAT3-210ENST00000540090 IGHV3OR16-8A0A075B7F1 116 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 TEX50A0A1B0GTY4 177 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 SCGNO76038 276 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 MFAP2P55001 183 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 ZNF367Q7RTV3 350 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 RNF2Q99496 336 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 PLEKHA2Q9HB19 425 aa14.62□□□□□ -0.07
LPCAT3-210ENST00000540090 IGHV3-21A0A0B4J1V1 117 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 PPYP01298 95 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 PTHLHP12272 177 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 CATR1Q13166 79 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 TBCEQ15813 527 aaPredicted RBP14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 C22orf42Q6IC83 251 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 DMBX1Q8NFW5 382 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 NDUFA4L2Q9NRX3 87 aa14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 F11RQ9Y624 299 aaKnown RBP14.61□□□□□ -0.07
LPCAT3-210ENST00000540090 DNAH17Q9UFH2 4485 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 SMIM30A4D0T7 59 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 NOTOA8MTQ0 251 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 K7EIM0 57 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 CHEK1O14757 476 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 AQP4P55087 323 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 ARPC4P59998 168 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 BEST4Q8NFU0 473 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 OR1L8Q8NGR8 309 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 ZNF414Q96IQ9 312 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 RHPN1-AS1Q9BWJ2 59 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 SLC5A7Q9GZV3 580 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 APLNQ9ULZ1 77 aa14.6□□□□□ -0.07
LPCAT3-210ENST00000540090 IGHV7-4-1A0A0J9YVY3 117 aa14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 CTSGP08311 255 aa14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 GVQW1Q8N7I0 195 aa14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 UBAC2Q8NBM4 344 aa14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 PKHD1P08F94 4074 aa14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 DYNC1H1Q14204 4646 aaKnown RBP14.59□□□□□ -0.07
LPCAT3-210ENST00000540090 MRPS14O60783 128 aaKnown RBP14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 TFPI2P48307 235 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 Q56UQ5 140 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 FAM90A2PQ658T7 463 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 ZNF818PQ6ZRF7 136 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 HOGA1Q86XE5 327 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 TMEM116Q8NCL8 245 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 OR51H1Q8NH63 302 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 COMMD9Q9P000 198 aa14.58□□□□□ -0.08
LPCAT3-210ENST00000540090 IGLL5B9A064 214 aa14.57□□□□□ -0.08
LPCAT3-210ENST00000540090 DEFB4AO15263 64 aa14.57□□□□□ -0.08
LPCAT3-210ENST00000540090 GIMAP1Q8WWP7 306 aa14.57□□□□□ -0.08
LPCAT3-210ENST00000540090 LSM10Q969L4 123 aaKnown RBP14.57□□□□□ -0.08
LPCAT3-210ENST00000540090 OR10C1Q96KK4 312 aa14.57□□□□□ -0.08
LPCAT3-210ENST00000540090 FXYD4P59646 89 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 RELQ04864 619 aaPredicted RBP14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 TMEM187Q14656 261 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 AADACL3Q5VUY0 350 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms