RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NTF3P20783 257 aa11.47□□□□□ -0.57
SCNN1A-215ENST00000540037 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
SCNN1A-215ENST00000540037 ARG2P78540 354 aa11.47□□□□□ -0.57
SCNN1A-215ENST00000540037 SLC35E1Q96K37 410 aa11.47□□□□□ -0.57
SCNN1A-215ENST00000540037 SPRR3Q9UBC9 169 aa11.47□□□□□ -0.57
SCNN1A-215ENST00000540037 C3orf79P0CE67 100 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 RHOBP62745 196 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 MORN2Q502X0 79 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 TEPPQ6URK8 271 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 Q6ZN92 141 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 RNF2Q99496 336 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 GNB1LQ9BYB4 327 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 CADP27708 2225 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 BMPR1BO00238 502 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 SPINT2O43291 252 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 CA2P00918 260 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 MLANAQ16655 118 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 NIT1Q86X76 327 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 FAM168AQ92567 244 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 SSBP3Q9BWW4 388 aaPredicted RBP11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 TP73-AS1Q9UF72 201 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 ZFP30Q9Y2G7 519 aa11.46□□□□□ -0.57
SCNN1A-215ENST00000540037 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 TMPRSS3P57727 454 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 CX3CL1P78423 397 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 C11orf52Q96A22 123 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 ZNF503Q96F45 646 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 LINC00479Q96M42 142 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 TXN2Q99757 166 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 GCM1Q9NP62 436 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 SERTAD4Q9NUC0 356 aa11.46□□□□□ -0.58
SCNN1A-215ENST00000540037 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 C9JCJ5 164 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 IGLC2P0DOY2 106 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 IGLC3P0DOY3 106 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 MRPL49Q13405 166 aaKnown RBP11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 AARDQ4LEZ3 155 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 KCNS1Q96KK3 526 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 TUBG2Q9NRH3 451 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 DUSP13Q9UII6 198 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 NCOR1O75376 2440 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 C9orf172C9J069 976 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 ERVK-16P61578 105 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 WDR31Q8NA23 367 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 ZNRF1Q8ND25 227 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 GMPPAQ96IJ6 420 aaPredicted RBP11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
SCNN1A-215ENST00000540037 OR5G3P0C626 314 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 LINC00869P0C866 280 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 GABRA6Q16445 453 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 CDC42EP3Q9UKI2 254 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 LAMA5O15230 3695 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 A0A1W2PNU3 283 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 OR7C2O60412 319 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 NPY1RP25929 384 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 HINT1P49773 126 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 SLAQ13239 276 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 SPRNQ5BIV9 151 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 LRRC29Q8WV35 223 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 S1PR3Q99500 378 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 TRAV9-1A0A075B6T8 112 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 CCL25O15444 150 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 PRDX2P32119 198 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 ATP1A1-AS1Q5TC04 95 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 TSKUQ8WUA8 353 aa11.44□□□□□ -0.58
SCNN1A-215ENST00000540037 PCNX2A6NKB5 2137 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 DPRXA6NFQ7 191 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR20EP86478 221 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR20CP86479 221 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR20DP86480 221 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR20BP86481 221 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR20AP86496 221 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 UNQ5815/PRO19632Q6UWF5 114 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 CXXC4Q9H2H0 198 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 IGKV1D-17A0A075B6S4 117 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 TDGF1P13385 188 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 LOXL3P58215 753 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms